Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Rif1Q6PR54 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Rif1Q6PR54 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.15□□□□□ -0.79
Rif1Q6PR54 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Rif1Q6PR54 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Rif1Q6PR54 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
Rif1Q6PR54 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Gm12418-201ENSMUST00000118116 942 ntBASIC10.14□□□□□ -0.79
Rif1Q6PR54 Gm12791-201ENSMUST00000120788 655 ntBASIC10.14□□□□□ -0.79
Rif1Q6PR54 Gm43671-201ENSMUST00000200422 433 ntBASIC10.14□□□□□ -0.79
Rif1Q6PR54 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC10.14□□□□□ -0.79
Rif1Q6PR54 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC10.14□□□□□ -0.79
Rif1Q6PR54 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC10.14□□□□□ -0.79
Rif1Q6PR54 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.14□□□□□ -0.79
Rif1Q6PR54 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Gm14829-201ENSMUST00000121499 1138 ntBASIC10.14□□□□□ -0.79
Rif1Q6PR54 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Rif1Q6PR54 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Rif1Q6PR54 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.13□□□□□ -0.79
Rif1Q6PR54 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Gm23129-201ENSMUST00000104259 132 ntBASIC10.13□□□□□ -0.79
Rif1Q6PR54 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC10.13□□□□□ -0.79
Rif1Q6PR54 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Ints5-203ENSMUST00000191089 568 ntTSL 5 BASIC10.13□□□□□ -0.79
Rif1Q6PR54 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Rif1Q6PR54 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms