Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm3017-201ENSMUST00000203603 1126 ntBASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Gm18059-201ENSMUST00000208073 580 ntBASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Ap3s1-202ENSMUST00000224622 978 ntBASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Gm8325-201ENSMUST00000099086 453 ntBASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Snrnp40Q6PE01 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Snrnp40Q6PE01 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.52□□□□□ -0.72
Snrnp40Q6PE01 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Snrnp40Q6PE01 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.52□□□□□ -0.72
Snrnp40Q6PE01 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.52□□□□□ -0.72
Snrnp40Q6PE01 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Gm25766-201ENSMUST00000104101 131 ntBASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 n-R5s84-201ENSMUST00000122591 109 ntBASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Mir6407-201ENSMUST00000184510 101 ntBASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Gm5451-201ENSMUST00000080545 579 ntBASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Snrnp40Q6PE01 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Gm23272-201ENSMUST00000104053 129 ntBASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Gm11422-201ENSMUST00000118925 1103 ntBASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Gm13022-201ENSMUST00000121181 285 ntBASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Gm26134-201ENSMUST00000178484 110 ntBASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.51□□□□□ -0.73
Snrnp40Q6PE01 Gm8574-201ENSMUST00000203207 924 ntBASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms