Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ecm1Q61508 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ecm1Q61508 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ecm1Q61508 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ecm1Q61508 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.2□□□□□ -0.3
Ecm1Q61508 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ecm1Q61508 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.2□□□□□ -0.3
Ecm1Q61508 Gm14441-201ENSMUST00000121960 540 ntBASIC13.2□□□□□ -0.3
Ecm1Q61508 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13.2□□□□□ -0.3
Ecm1Q61508 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.2□□□□□ -0.3
Ecm1Q61508 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Ecm1Q61508 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.2□□□□□ -0.3
Ecm1Q61508 Gm5982-201ENSMUST00000196234 512 ntBASIC13.2□□□□□ -0.3
Ecm1Q61508 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC13.2□□□□□ -0.3
Ecm1Q61508 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.2□□□□□ -0.3
Ecm1Q61508 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.2□□□□□ -0.3
Ecm1Q61508 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ecm1Q61508 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ecm1Q61508 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ecm1Q61508 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ecm1Q61508 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ecm1Q61508 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ecm1Q61508 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ecm1Q61508 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ecm1Q61508 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ecm1Q61508 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ecm1Q61508 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ecm1Q61508 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.2□□□□□ -0.3
Ecm1Q61508 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.2□□□□□ -0.3
Ecm1Q61508 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ecm1Q61508 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ecm1Q61508 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ecm1Q61508 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ecm1Q61508 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ecm1Q61508 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ecm1Q61508 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Ecm1Q61508 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ecm1Q61508 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ecm1Q61508 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.19□□□□□ -0.3
Ecm1Q61508 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC13.19□□□□□ -0.3
Ecm1Q61508 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ecm1Q61508 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ecm1Q61508 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ecm1Q61508 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ecm1Q61508 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.19□□□□□ -0.3
Ecm1Q61508 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ecm1Q61508 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ecm1Q61508 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.19□□□□□ -0.3
Ecm1Q61508 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.19□□□□□ -0.3
Ecm1Q61508 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ecm1Q61508 Gm25951-201ENSMUST00000175330 64 ntBASIC13.19□□□□□ -0.3
Ecm1Q61508 Gm22877-201ENSMUST00000175451 105 ntBASIC13.19□□□□□ -0.3
Ecm1Q61508 Mir8093-201ENSMUST00000185043 137 ntBASIC13.19□□□□□ -0.3
Ecm1Q61508 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ecm1Q61508 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC13.19□□□□□ -0.3
Ecm1Q61508 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.19□□□□□ -0.3
Ecm1Q61508 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ecm1Q61508 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ecm1Q61508 Gm44124-201ENSMUST00000204159 472 ntBASIC13.19□□□□□ -0.3
Ecm1Q61508 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.19□□□□□ -0.3
Ecm1Q61508 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ecm1Q61508 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ecm1Q61508 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Ecm1Q61508 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ecm1Q61508 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ecm1Q61508 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ecm1Q61508 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ecm1Q61508 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Ecm1Q61508 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ecm1Q61508 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ecm1Q61508 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ecm1Q61508 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ecm1Q61508 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ecm1Q61508 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ecm1Q61508 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ecm1Q61508 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.18□□□□□ -0.3
Ecm1Q61508 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ecm1Q61508 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ecm1Q61508 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ecm1Q61508 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.18□□□□□ -0.3
Ecm1Q61508 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ecm1Q61508 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13.18□□□□□ -0.3
Ecm1Q61508 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC13.18□□□□□ -0.3
Ecm1Q61508 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.18□□□□□ -0.3
Ecm1Q61508 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.18□□□□□ -0.3
Ecm1Q61508 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC13.18□□□□□ -0.3
Ecm1Q61508 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.18□□□□□ -0.3
Ecm1Q61508 Gm3017-201ENSMUST00000203603 1126 ntBASIC13.18□□□□□ -0.3
Ecm1Q61508 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.18□□□□□ -0.3
Ecm1Q61508 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ecm1Q61508 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ecm1Q61508 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ecm1Q61508 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ecm1Q61508 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ecm1Q61508 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ecm1Q61508 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ecm1Q61508 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ecm1Q61508 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ecm1Q61508 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ecm1Q61508 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms