Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prdm1Q60636 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prdm1Q60636 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.96□□□□□ -0.17
Prdm1Q60636 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prdm1Q60636 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.96□□□□□ -0.17
Prdm1Q60636 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.96□□□□□ -0.17
Prdm1Q60636 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Prdm1Q60636 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prdm1Q60636 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.96□□□□□ -0.17
Prdm1Q60636 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Prdm1Q60636 Gm5363-201ENSMUST00000211927 938 ntBASIC13.96□□□□□ -0.17
Prdm1Q60636 Gm9797-202ENSMUST00000218003 294 ntBASIC13.96□□□□□ -0.17
Prdm1Q60636 Gm18730-201ENSMUST00000218038 343 ntBASIC13.96□□□□□ -0.17
Prdm1Q60636 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Prdm1Q60636 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prdm1Q60636 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prdm1Q60636 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prdm1Q60636 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.96□□□□□ -0.17
Prdm1Q60636 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.96□□□□□ -0.17
Prdm1Q60636 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Prdm1Q60636 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Prdm1Q60636 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Prdm1Q60636 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.96□□□□□ -0.18
Prdm1Q60636 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Prdm1Q60636 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Prdm1Q60636 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Prdm1Q60636 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.96□□□□□ -0.18
Prdm1Q60636 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Prdm1Q60636 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Prdm1Q60636 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prdm1Q60636 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prdm1Q60636 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prdm1Q60636 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.95□□□□□ -0.18
Prdm1Q60636 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prdm1Q60636 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prdm1Q60636 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prdm1Q60636 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prdm1Q60636 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prdm1Q60636 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.95□□□□□ -0.18
Prdm1Q60636 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prdm1Q60636 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.95□□□□□ -0.18
Prdm1Q60636 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prdm1Q60636 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Prdm1Q60636 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Prdm1Q60636 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.95□□□□□ -0.18
Prdm1Q60636 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
Prdm1Q60636 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Prdm1Q60636 Gm28686-201ENSMUST00000187404 609 ntBASIC13.95□□□□□ -0.18
Prdm1Q60636 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.95□□□□□ -0.18
Prdm1Q60636 Gm4157-201ENSMUST00000211647 679 ntBASIC13.95□□□□□ -0.18
Prdm1Q60636 Gm270-201ENSMUST00000223010 976 ntBASIC13.95□□□□□ -0.18
Prdm1Q60636 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prdm1Q60636 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Prdm1Q60636 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
Prdm1Q60636 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prdm1Q60636 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prdm1Q60636 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.95□□□□□ -0.18
Prdm1Q60636 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.95□□□□□ -0.18
Prdm1Q60636 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prdm1Q60636 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prdm1Q60636 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prdm1Q60636 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prdm1Q60636 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Prdm1Q60636 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Prdm1Q60636 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.95□□□□□ -0.18
Prdm1Q60636 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prdm1Q60636 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prdm1Q60636 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Prdm1Q60636 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Prdm1Q60636 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prdm1Q60636 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prdm1Q60636 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prdm1Q60636 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Prdm1Q60636 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prdm1Q60636 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prdm1Q60636 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Prdm1Q60636 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Prdm1Q60636 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prdm1Q60636 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prdm1Q60636 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Prdm1Q60636 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.94□□□□□ -0.18
Prdm1Q60636 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Prdm1Q60636 Gm23596-201ENSMUST00000104304 132 ntBASIC13.94□□□□□ -0.18
Prdm1Q60636 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Prdm1Q60636 Gm15515-201ENSMUST00000117827 822 ntBASIC13.94□□□□□ -0.18
Prdm1Q60636 Gm7857-201ENSMUST00000117957 358 ntBASIC13.94□□□□□ -0.18
Prdm1Q60636 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prdm1Q60636 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.94□□□□□ -0.18
Prdm1Q60636 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Prdm1Q60636 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.94□□□□□ -0.18
Prdm1Q60636 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Prdm1Q60636 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.94□□□□□ -0.18
Prdm1Q60636 Mir6927-201ENSMUST00000184494 71 ntBASIC13.94□□□□□ -0.18
Prdm1Q60636 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Prdm1Q60636 Gm18038-201ENSMUST00000197900 485 ntBASIC13.94□□□□□ -0.18
Prdm1Q60636 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.94□□□□□ -0.18
Prdm1Q60636 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prdm1Q60636 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prdm1Q60636 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Prdm1Q60636 Gm5705-201ENSMUST00000066241 711 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms