Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.11□□□□□ -0.47
Bdp1Q571C7 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Gm6755-201ENSMUST00000100598 864 ntBASIC12.11□□□□□ -0.47
Bdp1Q571C7 Gm6740-201ENSMUST00000100617 864 ntBASIC12.11□□□□□ -0.47
Bdp1Q571C7 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Gm20493-201ENSMUST00000173706 213 ntBASIC12.11□□□□□ -0.47
Bdp1Q571C7 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.11□□□□□ -0.47
Bdp1Q571C7 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.11□□□□□ -0.47
Bdp1Q571C7 Gm26174-201ENSMUST00000158415 219 ntBASIC12.11□□□□□ -0.47
Bdp1Q571C7 Gm27826-201ENSMUST00000175282 255 ntBASIC12.11□□□□□ -0.47
Bdp1Q571C7 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Gm9644-201ENSMUST00000212828 1183 ntBASIC12.11□□□□□ -0.47
Bdp1Q571C7 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Bdp1Q571C7 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Gm5507-201ENSMUST00000091897 1008 ntBASIC12.11□□□□□ -0.47
Bdp1Q571C7 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Bdp1Q571C7 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Bdp1Q571C7 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.1□□□□□ -0.47
Bdp1Q571C7 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.1□□□□□ -0.47
Bdp1Q571C7 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.1□□□□□ -0.47
Bdp1Q571C7 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC12.1□□□□□ -0.47
Bdp1Q571C7 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Gm18256-201ENSMUST00000209087 907 ntBASIC12.1□□□□□ -0.47
Bdp1Q571C7 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.1□□□□□ -0.47
Bdp1Q571C7 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Bdp1Q571C7 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC12.1□□□□□ -0.47
Bdp1Q571C7 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms