Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.34□□□□□ -0.59
Treml4Q3LRV9 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Treml4Q3LRV9 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Treml4Q3LRV9 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Treml4Q3LRV9 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Treml4Q3LRV9 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Treml4Q3LRV9 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Treml4Q3LRV9 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Treml4Q3LRV9 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Treml4Q3LRV9 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Treml4Q3LRV9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Treml4Q3LRV9 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Treml4Q3LRV9 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Treml4Q3LRV9 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Treml4Q3LRV9 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.34□□□□□ -0.59
Treml4Q3LRV9 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Treml4Q3LRV9 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Treml4Q3LRV9 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Treml4Q3LRV9 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.34□□□□□ -0.59
Treml4Q3LRV9 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Treml4Q3LRV9 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Treml4Q3LRV9 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Treml4Q3LRV9 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Treml4Q3LRV9 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Selenot-ps-201ENSMUST00000119098 593 ntBASIC11.33□□□□□ -0.6
Treml4Q3LRV9 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Gm44958-201ENSMUST00000203734 736 ntBASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Gm807-202ENSMUST00000224929 408 ntBASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Treml4Q3LRV9 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Treml4Q3LRV9 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Treml4Q3LRV9 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Treml4Q3LRV9 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.32□□□□□ -0.6
Treml4Q3LRV9 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Treml4Q3LRV9 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Treml4Q3LRV9 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Treml4Q3LRV9 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Treml4Q3LRV9 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Treml4Q3LRV9 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Treml4Q3LRV9 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Treml4Q3LRV9 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.32□□□□□ -0.6
Treml4Q3LRV9 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Treml4Q3LRV9 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Treml4Q3LRV9 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.32□□□□□ -0.6
Treml4Q3LRV9 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Treml4Q3LRV9 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.32□□□□□ -0.6
Treml4Q3LRV9 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.32□□□□□ -0.6
Treml4Q3LRV9 Gm3332-201ENSMUST00000189337 928 ntBASIC11.32□□□□□ -0.6
Treml4Q3LRV9 Gm7430-201ENSMUST00000193824 1144 ntBASIC11.32□□□□□ -0.6
Treml4Q3LRV9 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.32□□□□□ -0.6
Treml4Q3LRV9 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.32□□□□□ -0.6
Treml4Q3LRV9 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC11.32□□□□□ -0.6
Treml4Q3LRV9 Gm4157-201ENSMUST00000211647 679 ntBASIC11.32□□□□□ -0.6
Treml4Q3LRV9 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Treml4Q3LRV9 Gm2594-201ENSMUST00000214774 742 ntBASIC11.32□□□□□ -0.6
Treml4Q3LRV9 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.32□□□□□ -0.6
Treml4Q3LRV9 Gm5455-201ENSMUST00000058710 715 ntBASIC11.32□□□□□ -0.6
Treml4Q3LRV9 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Treml4Q3LRV9 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms