Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3KNL4 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3KNL4 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Q3KNL4 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Q3KNL4 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.75□□□□□ -0.53
Q3KNL4 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Q3KNL4 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.75□□□□□ -0.53
Q3KNL4 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Q3KNL4 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Q3KNL4 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.75□□□□□ -0.53
Q3KNL4 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.75□□□□□ -0.53
Q3KNL4 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3KNL4 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3KNL4 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3KNL4 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3KNL4 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3KNL4 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Q3KNL4 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Q3KNL4 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.74□□□□□ -0.53
Q3KNL4 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.74□□□□□ -0.53
Q3KNL4 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Q3KNL4 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Q3KNL4 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.74□□□□□ -0.53
Q3KNL4 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Q3KNL4 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.74□□□□□ -0.53
Q3KNL4 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.74□□□□□ -0.53
Q3KNL4 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.74□□□□□ -0.53
Q3KNL4 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.74□□□□□ -0.53
Q3KNL4 Gm25043-201ENSMUST00000158604 212 ntBASIC11.74□□□□□ -0.53
Q3KNL4 Gm27514-201ENSMUST00000183692 110 ntBASIC11.74□□□□□ -0.53
Q3KNL4 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.74□□□□□ -0.53
Q3KNL4 Gm18187-201ENSMUST00000196476 984 ntBASIC11.74□□□□□ -0.53
Q3KNL4 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.74□□□□□ -0.53
Q3KNL4 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.74□□□□□ -0.53
Q3KNL4 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.74□□□□□ -0.53
Q3KNL4 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Q3KNL4 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Q3KNL4 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Q3KNL4 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Q3KNL4 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.74□□□□□ -0.53
Q3KNL4 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Q3KNL4 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.74□□□□□ -0.53
Q3KNL4 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Q3KNL4 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Q3KNL4 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.74□□□□□ -0.53
Q3KNL4 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.74□□□□□ -0.53
Q3KNL4 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Q3KNL4 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Q3KNL4 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Q3KNL4 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.73□□□□□ -0.53
Q3KNL4 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.73□□□□□ -0.53
Q3KNL4 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Q3KNL4 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.73□□□□□ -0.53
Q3KNL4 Mospd4-201ENSMUST00000180618 576 ntBASIC11.73□□□□□ -0.53
Q3KNL4 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Q3KNL4 Gm5745-201ENSMUST00000183748 313 ntBASIC11.73□□□□□ -0.53
Q3KNL4 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.73□□□□□ -0.53
Q3KNL4 Gm43133-201ENSMUST00000197472 463 ntBASIC11.73□□□□□ -0.53
Q3KNL4 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms