Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.37□□□□□ -0.43
Smad1P70340 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.37□□□□□ -0.43
Smad1P70340 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.37□□□□□ -0.43
Smad1P70340 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.37□□□□□ -0.43
Smad1P70340 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
Smad1P70340 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Smad1P70340 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.37□□□□□ -0.43
Smad1P70340 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Smad1P70340 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.37□□□□□ -0.43
Smad1P70340 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smad1P70340 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Smad1P70340 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Smad1P70340 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Smad1P70340 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Smad1P70340 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.36□□□□□ -0.43
Smad1P70340 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.36□□□□□ -0.43
Smad1P70340 Gm15782-201ENSMUST00000121073 445 ntBASIC12.36□□□□□ -0.43
Smad1P70340 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.36□□□□□ -0.43
Smad1P70340 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.36□□□□□ -0.43
Smad1P70340 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.36□□□□□ -0.43
Smad1P70340 Gm43378-201ENSMUST00000199336 582 ntBASIC12.36□□□□□ -0.43
Smad1P70340 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Gm8959-201ENSMUST00000213150 571 ntBASIC12.36□□□□□ -0.43
Smad1P70340 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.36□□□□□ -0.43
Smad1P70340 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.36□□□□□ -0.43
Smad1P70340 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Smad1P70340 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.36□□□□□ -0.43
Smad1P70340 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.36□□□□□ -0.43
Smad1P70340 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.36□□□□□ -0.43
Smad1P70340 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smad1P70340 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smad1P70340 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smad1P70340 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smad1P70340 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smad1P70340 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Smad1P70340 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smad1P70340 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smad1P70340 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smad1P70340 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.35□□□□□ -0.43
Smad1P70340 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smad1P70340 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.35□□□□□ -0.43
Smad1P70340 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smad1P70340 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smad1P70340 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Smad1P70340 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Smad1P70340 Gm11531-201ENSMUST00000117614 555 ntBASIC12.35□□□□□ -0.43
Smad1P70340 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smad1P70340 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smad1P70340 Gm18304-201ENSMUST00000189162 546 ntBASIC12.35□□□□□ -0.43
Smad1P70340 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smad1P70340 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Smad1P70340 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.35□□□□□ -0.43
Smad1P70340 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.35□□□□□ -0.43
Smad1P70340 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Smad1P70340 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smad1P70340 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.35□□□□□ -0.43
Smad1P70340 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smad1P70340 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smad1P70340 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smad1P70340 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms