Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm5P62322 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Lsm5P62322 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC9.93□□□□□ -0.82
Lsm5P62322 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.93□□□□□ -0.82
Lsm5P62322 Gm11597-201ENSMUST00000121423 964 ntBASIC9.93□□□□□ -0.82
Lsm5P62322 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm5P62322 Gm5637-201ENSMUST00000153890 1119 ntBASIC9.93□□□□□ -0.82
Lsm5P62322 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm5P62322 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Lsm5P62322 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm5P62322 Mir8102-201ENSMUST00000184148 139 ntBASIC9.93□□□□□ -0.82
Lsm5P62322 AC167013.1-201ENSMUST00000228592 202 ntBASIC9.93□□□□□ -0.82
Lsm5P62322 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC9.93□□□□□ -0.82
Lsm5P62322 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Lsm5P62322 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm5P62322 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm5P62322 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Lsm5P62322 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.93□□□□□ -0.82
Lsm5P62322 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm5P62322 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm5P62322 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm5P62322 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm5P62322 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.93□□□□□ -0.82
Lsm5P62322 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.93□□□□□ -0.82
Lsm5P62322 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm5P62322 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm5P62322 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC9.93□□□□□ -0.82
Lsm5P62322 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm5P62322 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm5P62322 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm5P62322 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lsm5P62322 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm5P62322 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Lsm5P62322 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm5P62322 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm5P62322 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm5P62322 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.92□□□□□ -0.82
Lsm5P62322 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm5P62322 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm5P62322 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm5P62322 Syt7-204ENSMUST00000223586 1344 ntBASIC9.92□□□□□ -0.82
Lsm5P62322 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm5P62322 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC9.92□□□□□ -0.82
Lsm5P62322 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC9.92□□□□□ -0.82
Lsm5P62322 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm5P62322 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC9.92□□□□□ -0.82
Lsm5P62322 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm5P62322 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC9.92□□□□□ -0.82
Lsm5P62322 Mir7654-201ENSMUST00000185082 70 ntBASIC9.92□□□□□ -0.82
Lsm5P62322 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm5P62322 Gm37922-201ENSMUST00000195596 455 ntBASIC9.92□□□□□ -0.82
Lsm5P62322 Gm7446-201ENSMUST00000221035 1240 ntBASIC9.92□□□□□ -0.82
Lsm5P62322 AC139382.1-201ENSMUST00000221402 498 ntBASIC9.92□□□□□ -0.82
Lsm5P62322 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm5P62322 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Lsm5P62322 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm5P62322 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm5P62322 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm5P62322 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm5P62322 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm5P62322 Gm43622-201ENSMUST00000200140 2019 ntBASIC9.92□□□□□ -0.82
Lsm5P62322 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm5P62322 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm5P62322 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.92□□□□□ -0.82
Lsm5P62322 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm5P62322 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lsm5P62322 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.91□□□□□ -0.82
Lsm5P62322 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC9.91□□□□□ -0.82
Lsm5P62322 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC9.91□□□□□ -0.82
Lsm5P62322 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm5P62322 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm5P62322 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.91□□□□□ -0.82
Lsm5P62322 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.91□□□□□ -0.82
Lsm5P62322 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm5P62322 Btrc-209ENSMUST00000224478 2194 ntBASIC9.91□□□□□ -0.82
Lsm5P62322 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm5P62322 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Lsm5P62322 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Lsm5P62322 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm5P62322 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm5P62322 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm5P62322 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Lsm5P62322 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC9.91□□□□□ -0.82
Lsm5P62322 Gm11637-201ENSMUST00000120601 592 ntBASIC9.91□□□□□ -0.82
Lsm5P62322 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm5P62322 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC9.91□□□□□ -0.82
Lsm5P62322 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC9.91□□□□□ -0.82
Lsm5P62322 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC9.91□□□□□ -0.82
Lsm5P62322 Gm43514-201ENSMUST00000198852 424 ntBASIC9.91□□□□□ -0.82
Lsm5P62322 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC9.91□□□□□ -0.82
Lsm5P62322 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm5P62322 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm5P62322 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Lsm5P62322 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm5P62322 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm5P62322 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm5P62322 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm5P62322 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm5P62322 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lsm5P62322 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms