Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NcanP55066 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.57□□□□□ -0.4
NcanP55066 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
NcanP55066 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NcanP55066 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC12.57□□□□□ -0.4
NcanP55066 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
NcanP55066 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC12.57□□□□□ -0.4
NcanP55066 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NcanP55066 Mir432-201ENSMUST00000157230 75 ntBASIC12.57□□□□□ -0.4
NcanP55066 Gm16030-201ENSMUST00000159098 603 ntBASIC12.57□□□□□ -0.4
NcanP55066 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
NcanP55066 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.57□□□□□ -0.4
NcanP55066 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NcanP55066 Mir7088-201ENSMUST00000184227 86 ntBASIC12.57□□□□□ -0.4
NcanP55066 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.57□□□□□ -0.4
NcanP55066 Gm34379-201ENSMUST00000195036 290 ntBASIC12.57□□□□□ -0.4
NcanP55066 Gm43249-201ENSMUST00000200464 458 ntBASIC12.57□□□□□ -0.4
NcanP55066 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC12.57□□□□□ -0.4
NcanP55066 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC12.57□□□□□ -0.4
NcanP55066 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.57□□□□□ -0.4
NcanP55066 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NcanP55066 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NcanP55066 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
NcanP55066 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
NcanP55066 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NcanP55066 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
NcanP55066 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NcanP55066 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
NcanP55066 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NcanP55066 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.57□□□□□ -0.4
NcanP55066 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NcanP55066 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.57□□□□□ -0.4
NcanP55066 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
NcanP55066 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
NcanP55066 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NcanP55066 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NcanP55066 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NcanP55066 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NcanP55066 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.56□□□□□ -0.4
NcanP55066 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Mir705-201ENSMUST00000102058 82 ntBASIC12.56□□□□□ -0.4
NcanP55066 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
NcanP55066 Gm15815-201ENSMUST00000120569 255 ntBASIC12.56□□□□□ -0.4
NcanP55066 Defa-ps16-201ENSMUST00000121939 171 ntBASIC12.56□□□□□ -0.4
NcanP55066 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.56□□□□□ -0.4
NcanP55066 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC12.56□□□□□ -0.4
NcanP55066 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC12.56□□□□□ -0.4
NcanP55066 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Gm28937-201ENSMUST00000185413 695 ntBASIC12.56□□□□□ -0.4
NcanP55066 Gm29400-201ENSMUST00000187208 695 ntBASIC12.56□□□□□ -0.4
NcanP55066 Gm28662-201ENSMUST00000188446 695 ntBASIC12.56□□□□□ -0.4
NcanP55066 Gm28251-201ENSMUST00000188835 695 ntBASIC12.56□□□□□ -0.4
NcanP55066 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC12.56□□□□□ -0.4
NcanP55066 Gm8197-202ENSMUST00000193422 934 ntBASIC12.56□□□□□ -0.4
NcanP55066 Gm37318-201ENSMUST00000194325 695 ntBASIC12.56□□□□□ -0.4
NcanP55066 Gm38017-201ENSMUST00000194768 695 ntBASIC12.56□□□□□ -0.4
NcanP55066 Gm37287-201ENSMUST00000195449 695 ntBASIC12.56□□□□□ -0.4
NcanP55066 Gm37793-201ENSMUST00000195548 695 ntBASIC12.56□□□□□ -0.4
NcanP55066 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
NcanP55066 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.56□□□□□ -0.4
NcanP55066 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.56□□□□□ -0.4
NcanP55066 AC129017.2-201ENSMUST00000226118 1284 ntBASIC12.56□□□□□ -0.4
NcanP55066 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
NcanP55066 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.56□□□□□ -0.4
NcanP55066 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.56□□□□□ -0.4
NcanP55066 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NcanP55066 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NcanP55066 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
NcanP55066 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NcanP55066 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.55□□□□□ -0.4
NcanP55066 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
NcanP55066 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NcanP55066 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.55□□□□□ -0.4
NcanP55066 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms