Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h2P0C090 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h2P0C090 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h2P0C090 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h2P0C090 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h2P0C090 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h2P0C090 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Rc3h2P0C090 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h2P0C090 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.24□□□□□ -0.45
Rc3h2P0C090 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rc3h2P0C090 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.23□□□□□ -0.45
Rc3h2P0C090 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.23□□□□□ -0.45
Rc3h2P0C090 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.23□□□□□ -0.45
Rc3h2P0C090 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.23□□□□□ -0.45
Rc3h2P0C090 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.23□□□□□ -0.45
Rc3h2P0C090 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.23□□□□□ -0.45
Rc3h2P0C090 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.23□□□□□ -0.45
Rc3h2P0C090 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rc3h2P0C090 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.22□□□□□ -0.45
Rc3h2P0C090 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rc3h2P0C090 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Gm19459-201ENSMUST00000176240 835 ntBASIC12.22□□□□□ -0.45
Rc3h2P0C090 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.22□□□□□ -0.45
Rc3h2P0C090 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Gm5051-201ENSMUST00000204085 485 ntBASIC12.22□□□□□ -0.45
Rc3h2P0C090 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rc3h2P0C090 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.22□□□□□ -0.45
Rc3h2P0C090 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.22□□□□□ -0.45
Rc3h2P0C090 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.22□□□□□ -0.45
Rc3h2P0C090 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rc3h2P0C090 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.21□□□□□ -0.45
Rc3h2P0C090 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.21□□□□□ -0.45
Rc3h2P0C090 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
Rc3h2P0C090 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rc3h2P0C090 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rc3h2P0C090 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms