Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
NclP09405 Gm44414-201ENSMUST00000203660 2109 ntBASIC17.75■□□□□ 0.43
NclP09405 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NclP09405 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC17.75■□□□□ 0.43
NclP09405 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NclP09405 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NclP09405 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NclP09405 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NclP09405 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC17.75■□□□□ 0.43
NclP09405 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NclP09405 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC17.75■□□□□ 0.43
NclP09405 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NclP09405 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC17.75■□□□□ 0.43
NclP09405 Gm13263-201ENSMUST00000121271 838 ntBASIC17.75■□□□□ 0.43
NclP09405 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
NclP09405 Gm17931-201ENSMUST00000208132 634 ntBASIC17.75■□□□□ 0.43
NclP09405 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
NclP09405 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC17.75■□□□□ 0.43
NclP09405 AC113082.1-201ENSMUST00000217324 327 ntBASIC17.75■□□□□ 0.43
NclP09405 AC134860.1-201ENSMUST00000224867 660 ntBASIC17.75■□□□□ 0.43
NclP09405 AC154849.4-201ENSMUST00000224868 365 ntBASIC17.75■□□□□ 0.43
NclP09405 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NclP09405 Gm9785-201ENSMUST00000062642 1006 ntBASIC17.75■□□□□ 0.43
NclP09405 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NclP09405 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NclP09405 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NclP09405 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NclP09405 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NclP09405 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NclP09405 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NclP09405 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC17.74■□□□□ 0.43
NclP09405 Nudt18-202ENSMUST00000228554 3619 ntBASIC17.74■□□□□ 0.43
NclP09405 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NclP09405 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NclP09405 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC17.74■□□□□ 0.43
NclP09405 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NclP09405 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NclP09405 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
NclP09405 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NclP09405 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NclP09405 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NclP09405 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NclP09405 Gm8815-201ENSMUST00000173809 620 ntBASIC17.74■□□□□ 0.43
NclP09405 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NclP09405 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC17.74■□□□□ 0.43
NclP09405 Mir7686-201ENSMUST00000200604 57 ntBASIC17.74■□□□□ 0.43
NclP09405 Gm44124-201ENSMUST00000204159 472 ntBASIC17.74■□□□□ 0.43
NclP09405 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NclP09405 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
NclP09405 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NclP09405 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NclP09405 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NclP09405 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NclP09405 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NclP09405 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NclP09405 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NclP09405 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
NclP09405 Matn2-203ENSMUST00000226766 3252 ntBASIC17.74■□□□□ 0.43
NclP09405 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NclP09405 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NclP09405 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NclP09405 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC17.74■□□□□ 0.43
NclP09405 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NclP09405 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NclP09405 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NclP09405 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NclP09405 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NclP09405 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NclP09405 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NclP09405 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NclP09405 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NclP09405 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NclP09405 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NclP09405 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NclP09405 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC17.73■□□□□ 0.43
NclP09405 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC17.73■□□□□ 0.43
NclP09405 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC17.73■□□□□ 0.43
NclP09405 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NclP09405 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
NclP09405 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NclP09405 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC17.73■□□□□ 0.43
NclP09405 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC17.73■□□□□ 0.43
NclP09405 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
NclP09405 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NclP09405 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
NclP09405 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NclP09405 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NclP09405 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NclP09405 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC17.72■□□□□ 0.43
NclP09405 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
NclP09405 Gm43868-201ENSMUST00000205187 2114 ntBASIC17.72■□□□□ 0.43
NclP09405 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NclP09405 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NclP09405 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
NclP09405 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NclP09405 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
NclP09405 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NclP09405 Gm15207-201ENSMUST00000119259 442 ntBASIC17.72■□□□□ 0.43
NclP09405 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC17.72■□□□□ 0.43
NclP09405 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms