Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Hoxc8P09025 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Hoxc8P09025 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Hoxc8P09025 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hoxc8P09025 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.67□□□□□ -0.38
Hoxc8P09025 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc8P09025 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Hoxc8P09025 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc8P09025 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc8P09025 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc8P09025 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Hoxc8P09025 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc8P09025 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc8P09025 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc8P09025 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc8P09025 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc8P09025 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc8P09025 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hoxc8P09025 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Hoxc8P09025 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hoxc8P09025 Gm14219-201ENSMUST00000120414 288 ntBASIC12.66□□□□□ -0.38
Hoxc8P09025 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.66□□□□□ -0.38
Hoxc8P09025 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.66□□□□□ -0.38
Hoxc8P09025 Gm25492-201ENSMUST00000157383 129 ntBASIC12.66□□□□□ -0.38
Hoxc8P09025 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.66□□□□□ -0.38
Hoxc8P09025 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.66□□□□□ -0.38
Hoxc8P09025 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc8P09025 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.66□□□□□ -0.38
Hoxc8P09025 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.66□□□□□ -0.38
Hoxc8P09025 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.66□□□□□ -0.38
Hoxc8P09025 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Hoxc8P09025 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.66□□□□□ -0.38
Hoxc8P09025 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.66□□□□□ -0.38
Hoxc8P09025 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.66□□□□□ -0.38
Hoxc8P09025 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.66□□□□□ -0.38
Hoxc8P09025 Gm30671-201ENSMUST00000214898 318 ntBASIC12.66□□□□□ -0.38
Hoxc8P09025 Gm9139-201ENSMUST00000218817 700 ntBASIC12.66□□□□□ -0.38
Hoxc8P09025 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc8P09025 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Hoxc8P09025 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Hoxc8P09025 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.66□□□□□ -0.38
Hoxc8P09025 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Hoxc8P09025 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.66□□□□□ -0.38
Hoxc8P09025 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Hoxc8P09025 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc8P09025 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc8P09025 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc8P09025 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Hoxc8P09025 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Hoxc8P09025 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxc8P09025 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxc8P09025 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc8P09025 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc8P09025 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc8P09025 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc8P09025 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc8P09025 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc8P09025 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc8P09025 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.65□□□□□ -0.38
Hoxc8P09025 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc8P09025 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc8P09025 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.65□□□□□ -0.38
Hoxc8P09025 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.65□□□□□ -0.38
Hoxc8P09025 Gm11340-201ENSMUST00000119226 412 ntBASIC12.65□□□□□ -0.38
Hoxc8P09025 Gm12030-201ENSMUST00000121917 223 ntBASIC12.65□□□□□ -0.38
Hoxc8P09025 Gm12628-201ENSMUST00000122193 382 ntBASIC12.65□□□□□ -0.38
Hoxc8P09025 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxc8P09025 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.65□□□□□ -0.38
Hoxc8P09025 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.65□□□□□ -0.38
Hoxc8P09025 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.65□□□□□ -0.38
Hoxc8P09025 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.65□□□□□ -0.38
Hoxc8P09025 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.65□□□□□ -0.38
Hoxc8P09025 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.65□□□□□ -0.38
Hoxc8P09025 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.65□□□□□ -0.38
Hoxc8P09025 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.65□□□□□ -0.38
Hoxc8P09025 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.65□□□□□ -0.38
Hoxc8P09025 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc8P09025 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc8P09025 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxc8P09025 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc8P09025 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc8P09025 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc8P09025 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc8P09025 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc8P09025 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxc8P09025 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Hoxc8P09025 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.39
Hoxc8P09025 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.65□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms