Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.08□□□□□ -0.8
Hoxa3P02831 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.08□□□□□ -0.8
Hoxa3P02831 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Hoxa3P02831 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Hoxa3P02831 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.08□□□□□ -0.8
Hoxa3P02831 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Hoxa3P02831 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Hoxa3P02831 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Hoxa3P02831 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.07□□□□□ -0.8
Hoxa3P02831 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Hoxa3P02831 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.07□□□□□ -0.8
Hoxa3P02831 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.07□□□□□ -0.8
Hoxa3P02831 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 Gm15711-201ENSMUST00000118889 535 ntBASIC10.07□□□□□ -0.8
Hoxa3P02831 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.07□□□□□ -0.8
Hoxa3P02831 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.07□□□□□ -0.8
Hoxa3P02831 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.07□□□□□ -0.8
Hoxa3P02831 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC10.07□□□□□ -0.8
Hoxa3P02831 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.07□□□□□ -0.8
Hoxa3P02831 Gm17040-202ENSMUST00000170597 889 ntBASIC10.07□□□□□ -0.8
Hoxa3P02831 Gm29615-201ENSMUST00000185371 697 ntBASIC10.07□□□□□ -0.8
Hoxa3P02831 Gm28224-201ENSMUST00000186078 697 ntBASIC10.07□□□□□ -0.8
Hoxa3P02831 Gm29001-201ENSMUST00000186177 697 ntBASIC10.07□□□□□ -0.8
Hoxa3P02831 Gm28292-201ENSMUST00000186593 697 ntBASIC10.07□□□□□ -0.8
Hoxa3P02831 Gm28101-201ENSMUST00000187608 697 ntBASIC10.07□□□□□ -0.8
Hoxa3P02831 Gm29076-201ENSMUST00000187689 697 ntBASIC10.07□□□□□ -0.8
Hoxa3P02831 Gm28302-201ENSMUST00000187931 697 ntBASIC10.07□□□□□ -0.8
Hoxa3P02831 Gm28646-201ENSMUST00000188220 697 ntBASIC10.07□□□□□ -0.8
Hoxa3P02831 Gm28205-201ENSMUST00000189177 697 ntBASIC10.07□□□□□ -0.8
Hoxa3P02831 Gm29032-201ENSMUST00000189797 697 ntBASIC10.07□□□□□ -0.8
Hoxa3P02831 Gm28695-201ENSMUST00000190300 697 ntBASIC10.07□□□□□ -0.8
Hoxa3P02831 Gm37448-201ENSMUST00000192795 697 ntBASIC10.07□□□□□ -0.8
Hoxa3P02831 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.07□□□□□ -0.8
Hoxa3P02831 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.07□□□□□ -0.8
Hoxa3P02831 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.07□□□□□ -0.8
Hoxa3P02831 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Hoxa3P02831 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Hoxa3P02831 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.07□□□□□ -0.8
Hoxa3P02831 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.07□□□□□ -0.8
Hoxa3P02831 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Hoxa3P02831 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hoxa3P02831 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hoxa3P02831 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.06□□□□□ -0.8
Hoxa3P02831 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hoxa3P02831 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hoxa3P02831 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hoxa3P02831 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hoxa3P02831 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.06□□□□□ -0.8
Hoxa3P02831 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hoxa3P02831 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Hoxa3P02831 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hoxa3P02831 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hoxa3P02831 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Hoxa3P02831 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.06□□□□□ -0.8
Hoxa3P02831 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.06□□□□□ -0.8
Hoxa3P02831 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hoxa3P02831 AU022133-201ENSMUST00000200601 873 ntBASIC10.06□□□□□ -0.8
Hoxa3P02831 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hoxa3P02831 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Hoxa3P02831 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hoxa3P02831 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hoxa3P02831 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hoxa3P02831 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.06□□□□□ -0.8
Hoxa3P02831 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hoxa3P02831 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hoxa3P02831 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hoxa3P02831 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hoxa3P02831 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.06□□□□□ -0.8
Hoxa3P02831 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hoxa3P02831 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Hoxa3P02831 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.06□□□□□ -0.8
Hoxa3P02831 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Hoxa3P02831 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms