Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm25517-201ENSMUST00000083865 134 ntBASIC13.17□□□□□ -0.3
Trdmt1O55055 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.17□□□□□ -0.3
Trdmt1O55055 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.17□□□□□ -0.3
Trdmt1O55055 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trdmt1O55055 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.17□□□□□ -0.3
Trdmt1O55055 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdmt1O55055 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trdmt1O55055 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trdmt1O55055 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdmt1O55055 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdmt1O55055 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdmt1O55055 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdmt1O55055 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdmt1O55055 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdmt1O55055 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdmt1O55055 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trdmt1O55055 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.16□□□□□ -0.3
Trdmt1O55055 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdmt1O55055 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trdmt1O55055 Gm23272-201ENSMUST00000104053 129 ntBASIC13.16□□□□□ -0.3
Trdmt1O55055 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Trdmt1O55055 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdmt1O55055 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trdmt1O55055 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trdmt1O55055 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Trdmt1O55055 Gm24398-201ENSMUST00000157870 109 ntBASIC13.16□□□□□ -0.3
Trdmt1O55055 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trdmt1O55055 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.16□□□□□ -0.3
Trdmt1O55055 Gm45594-201ENSMUST00000211717 241 ntBASIC13.16□□□□□ -0.3
Trdmt1O55055 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trdmt1O55055 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trdmt1O55055 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdmt1O55055 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdmt1O55055 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trdmt1O55055 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trdmt1O55055 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdmt1O55055 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.16□□□□□ -0.3
Trdmt1O55055 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Trdmt1O55055 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdmt1O55055 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.15□□□□□ -0.3
Trdmt1O55055 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 Gm3765-201ENSMUST00000130985 1447 ntBASIC13.15□□□□□ -0.3
Trdmt1O55055 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Trdmt1O55055 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trdmt1O55055 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.15□□□□□ -0.3
Trdmt1O55055 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 Gm10807-201ENSMUST00000177134 795 ntBASIC13.15□□□□□ -0.3
Trdmt1O55055 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.15□□□□□ -0.3
Trdmt1O55055 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
Trdmt1O55055 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 Gm44315-201ENSMUST00000203041 219 ntBASIC13.15□□□□□ -0.3
Trdmt1O55055 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.15□□□□□ -0.3
Trdmt1O55055 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.15□□□□□ -0.3
Trdmt1O55055 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.15□□□□□ -0.3
Trdmt1O55055 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trdmt1O55055 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdmt1O55055 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trdmt1O55055 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Trdmt1O55055 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trdmt1O55055 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trdmt1O55055 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trdmt1O55055 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trdmt1O55055 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trdmt1O55055 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trdmt1O55055 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trdmt1O55055 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.14□□□□□ -0.31
Trdmt1O55055 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trdmt1O55055 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trdmt1O55055 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms