Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
R3hdm1E9Q9Q2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
R3hdm1E9Q9Q2 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
R3hdm1E9Q9Q2 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
R3hdm1E9Q9Q2 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
R3hdm1E9Q9Q2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
R3hdm1E9Q9Q2 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
R3hdm1E9Q9Q2 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.25□□□□□ -0.29
R3hdm1E9Q9Q2 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.25□□□□□ -0.29
R3hdm1E9Q9Q2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
R3hdm1E9Q9Q2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
R3hdm1E9Q9Q2 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
R3hdm1E9Q9Q2 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
R3hdm1E9Q9Q2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
R3hdm1E9Q9Q2 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
R3hdm1E9Q9Q2 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
R3hdm1E9Q9Q2 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
R3hdm1E9Q9Q2 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
R3hdm1E9Q9Q2 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
R3hdm1E9Q9Q2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Gm11801-201ENSMUST00000117807 746 ntBASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Gm12969-201ENSMUST00000120199 1004 ntBASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Gm1848-201ENSMUST00000120711 789 ntBASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Gm42518-201ENSMUST00000196277 938 ntBASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
R3hdm1E9Q9Q2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Gm13600-201ENSMUST00000117949 744 ntBASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Gm5455-201ENSMUST00000058710 715 ntBASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
R3hdm1E9Q9Q2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
R3hdm1E9Q9Q2 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
R3hdm1E9Q9Q2 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
R3hdm1E9Q9Q2 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms