Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim39Q9ESN2 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim39Q9ESN2 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim39Q9ESN2 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim39Q9ESN2 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim39Q9ESN2 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trim39Q9ESN2 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Trim39Q9ESN2 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim39Q9ESN2 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim39Q9ESN2 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim39Q9ESN2 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim39Q9ESN2 Gm18719-201ENSMUST00000196696 1413 ntBASIC11.32□□□□□ -0.6
Trim39Q9ESN2 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim39Q9ESN2 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim39Q9ESN2 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trim39Q9ESN2 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim39Q9ESN2 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim39Q9ESN2 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim39Q9ESN2 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim39Q9ESN2 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim39Q9ESN2 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim39Q9ESN2 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim39Q9ESN2 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trim39Q9ESN2 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.31□□□□□ -0.6
Trim39Q9ESN2 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Gm14127-201ENSMUST00000117906 678 ntBASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Gm25261-201ENSMUST00000157416 134 ntBASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Gm36943-201ENSMUST00000194422 282 ntBASIC11.31□□□□□ -0.6
Trim39Q9ESN2 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Snora73a-201ENSMUST00000082453 205 ntBASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Gm22058-201ENSMUST00000083393 310 ntBASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim39Q9ESN2 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.3□□□□□ -0.6
Trim39Q9ESN2 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim39Q9ESN2 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim39Q9ESN2 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim39Q9ESN2 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trim39Q9ESN2 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim39Q9ESN2 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim39Q9ESN2 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim39Q9ESN2 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim39Q9ESN2 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim39Q9ESN2 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim39Q9ESN2 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim39Q9ESN2 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim39Q9ESN2 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 272.9 ms