Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Gm12502-201ENSMUST00000120197 444 ntBASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Gm8018-201ENSMUST00000173536 789 ntBASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Gm18304-201ENSMUST00000189162 546 ntBASIC11.35□□□□□ -0.59
Ska1Q9CPV1 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Gm6007-201ENSMUST00000208170 823 ntBASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Gm45925-201ENSMUST00000218882 744 ntBASIC11.35□□□□□ -0.59
Ska1Q9CPV1 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Ska1Q9CPV1 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.35□□□□□ -0.59
Ska1Q9CPV1 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Gm11597-201ENSMUST00000121423 964 ntBASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Gm23119-201ENSMUST00000158610 140 ntBASIC11.34□□□□□ -0.59
Ska1Q9CPV1 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Gm5781-201ENSMUST00000219792 443 ntBASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Ska1Q9CPV1 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Ska1Q9CPV1 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.33□□□□□ -0.59
Ska1Q9CPV1 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Ska1Q9CPV1 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms