Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Gm23912-201ENSMUST00000104687 87 ntBASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdh23Q99PF4 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Gm6158-201ENSMUST00000109467 904 ntBASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Gm14165-201ENSMUST00000121456 952 ntBASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Gm4294-201ENSMUST00000105169 614 ntBASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdh23Q99PF4 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.83□□□□□ -0.52
Cdh23Q99PF4 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Gm43244-201ENSMUST00000196994 1285 ntBASIC11.83□□□□□ -0.52
Cdh23Q99PF4 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Mir6359-201ENSMUST00000183668 81 ntBASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Mir6387-201ENSMUST00000184042 108 ntBASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Gm38103-201ENSMUST00000191707 864 ntBASIC11.83□□□□□ -0.52
Cdh23Q99PF4 AC124613.1-201ENSMUST00000198711 88 ntBASIC11.83□□□□□ -0.52
Cdh23Q99PF4 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Klf10-203ENSMUST00000227920 2144 ntBASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Gm12912-201ENSMUST00000121596 1381 ntBASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdh23Q99PF4 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh23Q99PF4 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh23Q99PF4 Gm23132-201ENSMUST00000104254 132 ntBASIC11.82□□□□□ -0.52
Cdh23Q99PF4 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh23Q99PF4 Gm7572-201ENSMUST00000182616 766 ntBASIC11.82□□□□□ -0.52
Cdh23Q99PF4 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC11.82□□□□□ -0.52
Cdh23Q99PF4 Gm18256-201ENSMUST00000209087 907 ntBASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms