Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Gtf2ird2Q99NI3 Mir7070-201ENSMUST00000183657 86 ntBASIC12.35□□□□□ -0.43
Gtf2ird2Q99NI3 Gm4607-201ENSMUST00000206649 577 ntBASIC12.35□□□□□ -0.43
Gtf2ird2Q99NI3 Gm270-201ENSMUST00000223010 976 ntBASIC12.35□□□□□ -0.43
Gtf2ird2Q99NI3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf2ird2Q99NI3 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf2ird2Q99NI3 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf2ird2Q99NI3 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gtf2ird2Q99NI3 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Gtf2ird2Q99NI3 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf2ird2Q99NI3 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gtf2ird2Q99NI3 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf2ird2Q99NI3 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Gtf2ird2Q99NI3 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf2ird2Q99NI3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.35□□□□□ -0.43
Gtf2ird2Q99NI3 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gtf2ird2Q99NI3 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf2ird2Q99NI3 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf2ird2Q99NI3 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf2ird2Q99NI3 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf2ird2Q99NI3 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf2ird2Q99NI3 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.35□□□□□ -0.43
Gtf2ird2Q99NI3 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf2ird2Q99NI3 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gtf2ird2Q99NI3 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Gm26286-201ENSMUST00000104166 134 ntBASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Gm12164-201ENSMUST00000121695 551 ntBASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Gm8343-201ENSMUST00000182705 994 ntBASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Gm4157-201ENSMUST00000211647 679 ntBASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.34□□□□□ -0.43
Gtf2ird2Q99NI3 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.33□□□□□ -0.43
Gtf2ird2Q99NI3 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Gm5419-201ENSMUST00000119301 527 ntBASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Gm15610-201ENSMUST00000120584 195 ntBASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gtf2ird2Q99NI3 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms