Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.64□□□□□ -0.39
Clp1Q99LI9 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Clp1Q99LI9 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Clp1Q99LI9 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.64□□□□□ -0.39
Clp1Q99LI9 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Gm22885-201ENSMUST00000157410 107 ntBASIC12.64□□□□□ -0.39
Clp1Q99LI9 Gm8459-201ENSMUST00000162504 760 ntBASIC12.64□□□□□ -0.39
Clp1Q99LI9 Mir6407-201ENSMUST00000184510 101 ntBASIC12.64□□□□□ -0.39
Clp1Q99LI9 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Gm44315-201ENSMUST00000203041 219 ntBASIC12.64□□□□□ -0.39
Clp1Q99LI9 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC12.64□□□□□ -0.39
Clp1Q99LI9 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clp1Q99LI9 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.64□□□□□ -0.39
Clp1Q99LI9 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clp1Q99LI9 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Clp1Q99LI9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clp1Q99LI9 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Clp1Q99LI9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.63□□□□□ -0.39
Clp1Q99LI9 Gm10807-201ENSMUST00000177134 795 ntBASIC12.63□□□□□ -0.39
Clp1Q99LI9 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.63□□□□□ -0.39
Clp1Q99LI9 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.63□□□□□ -0.39
Clp1Q99LI9 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Gm8574-201ENSMUST00000203207 924 ntBASIC12.63□□□□□ -0.39
Clp1Q99LI9 Gm9111-201ENSMUST00000219394 709 ntBASIC12.63□□□□□ -0.39
Clp1Q99LI9 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Mir483-201ENSMUST00000093631 73 ntBASIC12.63□□□□□ -0.39
Clp1Q99LI9 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.63□□□□□ -0.39
Clp1Q99LI9 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.63□□□□□ -0.39
Clp1Q99LI9 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clp1Q99LI9 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.62□□□□□ -0.39
Clp1Q99LI9 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Clp1Q99LI9 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clp1Q99LI9 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms