Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Gm4157-201ENSMUST00000211647 679 ntBASIC11.82□□□□□ -0.52
Cdhr1Q8VHP6 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.82□□□□□ -0.52
Cdhr1Q8VHP6 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.82□□□□□ -0.52
Cdhr1Q8VHP6 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdhr1Q8VHP6 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdhr1Q8VHP6 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdhr1Q8VHP6 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdhr1Q8VHP6 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdhr1Q8VHP6 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdhr1Q8VHP6 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdhr1Q8VHP6 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cdhr1Q8VHP6 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cdhr1Q8VHP6 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdhr1Q8VHP6 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Cdhr1Q8VHP6 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cdhr1Q8VHP6 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cdhr1Q8VHP6 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.82□□□□□ -0.52
Cdhr1Q8VHP6 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Gm13045-201ENSMUST00000119019 712 ntBASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Gm13408-201ENSMUST00000119822 798 ntBASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Gm11941-201ENSMUST00000119904 610 ntBASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Gm15432-201ENSMUST00000121106 195 ntBASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Gm12164-201ENSMUST00000121695 551 ntBASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Gm13935-201ENSMUST00000121859 798 ntBASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Gm3332-201ENSMUST00000189337 928 ntBASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Gm1821-202ENSMUST00000227415 750 ntBASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Ntng1-201ENSMUST00000051253 327 ntBASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cdhr1Q8VHP6 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 Gm12165-201ENSMUST00000117047 342 ntBASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 Gm11509-201ENSMUST00000117358 325 ntBASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 Gm7851-201ENSMUST00000117574 323 ntBASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdhr1Q8VHP6 Gm10051-201ENSMUST00000145209 414 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 154.5 ms