Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Gm7940-201ENSMUST00000218195 769 ntBASIC13.53□□□□□ -0.24
Syne4Q8CII8 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Syne4Q8CII8 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syne4Q8CII8 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Syne4Q8CII8 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Syne4Q8CII8 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
Syne4Q8CII8 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.53□□□□□ -0.24
Syne4Q8CII8 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Syne4Q8CII8 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Syne4Q8CII8 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Syne4Q8CII8 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Syne4Q8CII8 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Syne4Q8CII8 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Syne4Q8CII8 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
Syne4Q8CII8 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Syne4Q8CII8 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Syne4Q8CII8 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Syne4Q8CII8 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Syne4Q8CII8 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Syne4Q8CII8 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Syne4Q8CII8 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Syne4Q8CII8 Gm14807-201ENSMUST00000116640 983 ntBASIC13.52□□□□□ -0.25
Syne4Q8CII8 Gm13117-201ENSMUST00000120894 691 ntBASIC13.52□□□□□ -0.25
Syne4Q8CII8 Gm8459-201ENSMUST00000162504 760 ntBASIC13.52□□□□□ -0.25
Syne4Q8CII8 Gm4862-201ENSMUST00000170405 438 ntBASIC13.52□□□□□ -0.25
Syne4Q8CII8 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Syne4Q8CII8 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.52□□□□□ -0.25
Syne4Q8CII8 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Syne4Q8CII8 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Syne4Q8CII8 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Syne4Q8CII8 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC13.52□□□□□ -0.25
Syne4Q8CII8 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.52□□□□□ -0.25
Syne4Q8CII8 Gm23105-201ENSMUST00000083719 134 ntBASIC13.52□□□□□ -0.25
Syne4Q8CII8 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Syne4Q8CII8 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Syne4Q8CII8 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Syne4Q8CII8 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Syne4Q8CII8 Gm15784-201ENSMUST00000120260 1462 ntBASIC13.52□□□□□ -0.25
Syne4Q8CII8 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Syne4Q8CII8 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Syne4Q8CII8 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Syne4Q8CII8 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Syne4Q8CII8 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Syne4Q8CII8 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Syne4Q8CII8 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.52□□□□□ -0.25
Syne4Q8CII8 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Syne4Q8CII8 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Syne4Q8CII8 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Syne4Q8CII8 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.51□□□□□ -0.25
Syne4Q8CII8 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.51□□□□□ -0.25
Syne4Q8CII8 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Gm14892-201ENSMUST00000117636 267 ntBASIC13.51□□□□□ -0.25
Syne4Q8CII8 Gm12783-201ENSMUST00000121425 397 ntBASIC13.51□□□□□ -0.25
Syne4Q8CII8 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Syne4Q8CII8 Mir6923-201ENSMUST00000184592 72 ntBASIC13.51□□□□□ -0.25
Syne4Q8CII8 Gm37826-201ENSMUST00000195329 322 ntBASIC13.51□□□□□ -0.25
Syne4Q8CII8 Gm6722-201ENSMUST00000221586 390 ntBASIC13.51□□□□□ -0.25
Syne4Q8CII8 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms