Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CopaQ8CIE6 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.29□□□□□ -0.44
CopaQ8CIE6 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.29□□□□□ -0.44
CopaQ8CIE6 Gzmn-202ENSMUST00000225535 989 ntBASIC12.29□□□□□ -0.44
CopaQ8CIE6 Gm10076-201ENSMUST00000073238 384 ntBASIC12.29□□□□□ -0.44
CopaQ8CIE6 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CopaQ8CIE6 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.28□□□□□ -0.44
CopaQ8CIE6 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.28□□□□□ -0.44
CopaQ8CIE6 Gm13996-201ENSMUST00000118456 430 ntBASIC12.28□□□□□ -0.44
CopaQ8CIE6 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.28□□□□□ -0.44
CopaQ8CIE6 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CopaQ8CIE6 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
CopaQ8CIE6 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CopaQ8CIE6 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.27□□□□□ -0.44
CopaQ8CIE6 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
CopaQ8CIE6 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CopaQ8CIE6 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CopaQ8CIE6 Cog3-203ENSMUST00000227473 4197 ntBASIC12.27□□□□□ -0.44
CopaQ8CIE6 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
CopaQ8CIE6 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CopaQ8CIE6 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CopaQ8CIE6 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CopaQ8CIE6 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CopaQ8CIE6 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
CopaQ8CIE6 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CopaQ8CIE6 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Gm12015-201ENSMUST00000117065 843 ntBASIC12.27□□□□□ -0.45
CopaQ8CIE6 Gm12217-201ENSMUST00000118858 696 ntBASIC12.27□□□□□ -0.45
CopaQ8CIE6 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Gm6963-201ENSMUST00000147879 379 ntBASIC12.27□□□□□ -0.45
CopaQ8CIE6 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CopaQ8CIE6 Mir5120-201ENSMUST00000175020 78 ntBASIC12.27□□□□□ -0.45
CopaQ8CIE6 Rprl1-202ENSMUST00000198476 238 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms