Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Lrif1Q8CDD9 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Lrif1Q8CDD9 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lrif1Q8CDD9 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lrif1Q8CDD9 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lrif1Q8CDD9 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.87□□□□□ -0.51
Lrif1Q8CDD9 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lrif1Q8CDD9 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lrif1Q8CDD9 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Lrif1Q8CDD9 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lrif1Q8CDD9 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Lrif1Q8CDD9 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lrif1Q8CDD9 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lrif1Q8CDD9 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lrif1Q8CDD9 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lrif1Q8CDD9 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Gm22018-201ENSMUST00000104357 131 ntBASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lrif1Q8CDD9 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Gm11793-201ENSMUST00000120433 981 ntBASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Gm5781-201ENSMUST00000219792 443 ntBASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lrif1Q8CDD9 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms