Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Gm20426-201ENSMUST00000173657 440 ntBASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.99□□□□□ -0.17
Vps53Q8CCB4 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vps53Q8CCB4 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Gm12616-201ENSMUST00000118594 382 ntBASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Gm12624-201ENSMUST00000177615 382 ntBASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Gm12621-201ENSMUST00000177760 382 ntBASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Gm12615-201ENSMUST00000177970 382 ntBASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Gm12622-201ENSMUST00000177975 382 ntBASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Gm12627-201ENSMUST00000178412 382 ntBASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Gm12625-201ENSMUST00000179122 382 ntBASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Gm12614-201ENSMUST00000179586 382 ntBASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Gm12613-201ENSMUST00000180323 382 ntBASIC13.98□□□□□ -0.17
Vps53Q8CCB4 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Gzmn-202ENSMUST00000225535 989 ntBASIC13.98□□□□□ -0.17
Vps53Q8CCB4 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.98□□□□□ -0.17
Vps53Q8CCB4 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Gm12266-201ENSMUST00000120311 962 ntBASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Gm44100-201ENSMUST00000204329 436 ntBASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Vps53Q8CCB4 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms