Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Gm12196-201ENSMUST00000120954 262 ntBASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Gm12176-201ENSMUST00000121420 875 ntBASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.32□□□□□ -0.28
Trim47Q8C0E3 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Gm5733-201ENSMUST00000190232 939 ntBASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim47Q8C0E3 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Gm25509-201ENSMUST00000116985 106 ntBASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.31□□□□□ -0.28
Trim47Q8C0E3 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Gm23699-201ENSMUST00000158835 135 ntBASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Gm5369-201ENSMUST00000217499 588 ntBASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Gm21811-201ENSMUST00000096485 930 ntBASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Matn2-203ENSMUST00000226766 3252 ntBASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim47Q8C0E3 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim47Q8C0E3 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim47Q8C0E3 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim47Q8C0E3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim47Q8C0E3 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim47Q8C0E3 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim47Q8C0E3 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
Trim47Q8C0E3 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim47Q8C0E3 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trim47Q8C0E3 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms