Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Gm14441-201ENSMUST00000121960 540 ntBASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Mir5120-201ENSMUST00000175020 78 ntBASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Gm7848-201ENSMUST00000210739 718 ntBASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup54Q8BTS4 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Gm14724-201ENSMUST00000118400 537 ntBASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Gm8566-201ENSMUST00000120174 465 ntBASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Gm11450-201ENSMUST00000121144 333 ntBASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Gm9192-201ENSMUST00000183221 985 ntBASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Gm2553-201ENSMUST00000215986 605 ntBASIC12.25□□□□□ -0.45
Nup54Q8BTS4 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.25□□□□□ -0.45
Nup54Q8BTS4 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup54Q8BTS4 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup54Q8BTS4 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms