Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Depdc1bQ8BH88 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Depdc1bQ8BH88 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Depdc1bQ8BH88 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.06□□□□□ -0.32
Depdc1bQ8BH88 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Depdc1bQ8BH88 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Gm14277-201ENSMUST00000121195 360 ntBASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Gm35960-201ENSMUST00000202712 767 ntBASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.04□□□□□ -0.32
Depdc1bQ8BH88 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Gm14028-201ENSMUST00000117434 479 ntBASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Gm14832-201ENSMUST00000121289 322 ntBASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Gm27341-201ENSMUST00000183570 106 ntBASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Depdc1bQ8BH88 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms