Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Snrnp40Q6PE01 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Gm12990-201ENSMUST00000120372 468 ntBASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Gm37981-201ENSMUST00000194280 535 ntBASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Gm8342-201ENSMUST00000209839 757 ntBASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Gm9111-201ENSMUST00000219394 709 ntBASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Snrnp40Q6PE01 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Gm12419-201ENSMUST00000116649 636 ntBASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Gm11783-201ENSMUST00000119549 885 ntBASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Gm17798-201ENSMUST00000182282 1035 ntBASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Gm5621-201ENSMUST00000187303 640 ntBASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Gm38151-201ENSMUST00000195085 289 ntBASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Snrnp40Q6PE01 Gm44315-201ENSMUST00000203041 219 ntBASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms