Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Gm14017-201ENSMUST00000121934 386 ntBASIC14□□□□□ -0.17
Smarcc2Q6PDG5 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Gm9230-201ENSMUST00000188228 532 ntBASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Gm32999-201ENSMUST00000192693 562 ntBASIC14□□□□□ -0.17
Smarcc2Q6PDG5 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Gm45598-202ENSMUST00000210719 986 ntBASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Gm5419-201ENSMUST00000119301 527 ntBASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Gm12997-201ENSMUST00000120207 640 ntBASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Gm19187-201ENSMUST00000206781 892 ntBASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Gm45186-201ENSMUST00000206874 478 ntBASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Gm18212-201ENSMUST00000211678 889 ntBASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smarcc2Q6PDG5 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 Gm7722-201ENSMUST00000120646 741 ntBASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smarcc2Q6PDG5 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms