Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC9.16□□□□□ -0.94
Foxc1Q61572 Gm24239-201ENSMUST00000157791 255 ntBASIC9.16□□□□□ -0.94
Foxc1Q61572 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Gm7714-201ENSMUST00000169154 685 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Gm23363-201ENSMUST00000175024 79 ntBASIC9.16□□□□□ -0.94
Foxc1Q61572 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC9.16□□□□□ -0.94
Foxc1Q61572 Gm27501-201ENSMUST00000183599 107 ntBASIC9.16□□□□□ -0.94
Foxc1Q61572 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
Foxc1Q61572 Gm29018-201ENSMUST00000188707 925 ntTSL 3 BASIC9.16□□□□□ -0.94
Foxc1Q61572 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC9.16□□□□□ -0.94
Foxc1Q61572 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC9.16□□□□□ -0.94
Foxc1Q61572 Gm38233-201ENSMUST00000194259 807 ntBASIC9.16□□□□□ -0.94
Foxc1Q61572 Gm44681-201ENSMUST00000208447 842 ntBASIC9.16□□□□□ -0.94
Foxc1Q61572 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
Foxc1Q61572 Gm10608-202ENSMUST00000213924 676 ntBASIC9.16□□□□□ -0.94
Foxc1Q61572 AC166256.1-201ENSMUST00000219081 1271 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 AC132237.2-201ENSMUST00000221702 1209 ntBASIC9.16□□□□□ -0.94
Foxc1Q61572 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Krtap13-201ENSMUST00000053149 882 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Foxc1Q61572 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Foxc1Q61572 Gm26437-201ENSMUST00000082595 105 ntBASIC9.16□□□□□ -0.94
Foxc1Q61572 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Foxc1Q61572 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
Foxc1Q61572 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC9.16□□□□□ -0.94
Foxc1Q61572 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
Foxc1Q61572 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
Foxc1Q61572 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC9.16□□□□□ -0.94
Foxc1Q61572 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Foxc1Q61572 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Gm44891-201ENSMUST00000208817 2223 ntBASIC9.16□□□□□ -0.94
Foxc1Q61572 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Foxc1Q61572 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.16□□□□□ -0.94
Foxc1Q61572 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Foxc1Q61572 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Foxc1Q61572 Gm38273-201ENSMUST00000194987 2382 ntBASIC9.15□□□□□ -0.94
Foxc1Q61572 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Foxc1Q61572 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC9.15□□□□□ -0.94
Foxc1Q61572 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC9.15□□□□□ -0.94
Foxc1Q61572 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC9.15□□□□□ -0.94
Foxc1Q61572 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC9.15□□□□□ -0.94
Foxc1Q61572 Gm13438-201ENSMUST00000120100 573 ntBASIC9.15□□□□□ -0.94
Foxc1Q61572 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Foxc1Q61572 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC9.15□□□□□ -0.94
Foxc1Q61572 Gm5637-201ENSMUST00000153890 1119 ntBASIC9.15□□□□□ -0.94
Foxc1Q61572 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC9.15□□□□□ -0.94
Foxc1Q61572 Gm7584-201ENSMUST00000175829 940 ntBASIC9.15□□□□□ -0.94
Foxc1Q61572 Gm29396-201ENSMUST00000185659 716 ntBASIC9.15□□□□□ -0.94
Foxc1Q61572 Gm3116-201ENSMUST00000189440 1116 ntBASIC9.15□□□□□ -0.94
Foxc1Q61572 Gm37489-201ENSMUST00000191883 159 ntBASIC9.15□□□□□ -0.94
Foxc1Q61572 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC9.15□□□□□ -0.94
Foxc1Q61572 Trdv3-201ENSMUST00000198551 309 ntBASIC9.15□□□□□ -0.94
Foxc1Q61572 Gm18584-201ENSMUST00000203098 964 ntBASIC9.15□□□□□ -0.94
Foxc1Q61572 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC9.15□□□□□ -0.94
Foxc1Q61572 Gm18043-201ENSMUST00000216741 739 ntBASIC9.15□□□□□ -0.94
Foxc1Q61572 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC9.15□□□□□ -0.94
Foxc1Q61572 AC124569.4-201ENSMUST00000223830 1220 ntBASIC9.15□□□□□ -0.94
Foxc1Q61572 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Foxc1Q61572 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Foxc1Q61572 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Foxc1Q61572 Cbx1-203ENSMUST00000093943 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Foxc1Q61572 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms