Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six4Q61321 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six4Q61321 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six4Q61321 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six4Q61321 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six4Q61321 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six4Q61321 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six4Q61321 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Six4Q61321 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six4Q61321 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six4Q61321 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Six4Q61321 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six4Q61321 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Six4Q61321 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Six4Q61321 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.07□□□□□ -0.48
Six4Q61321 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Six4Q61321 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Six4Q61321 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Six4Q61321 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Gm14277-201ENSMUST00000121195 360 ntBASIC12.07□□□□□ -0.48
Six4Q61321 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.07□□□□□ -0.48
Six4Q61321 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Six4Q61321 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.07□□□□□ -0.48
Six4Q61321 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
Six4Q61321 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Six4Q61321 Gm8343-201ENSMUST00000182705 994 ntBASIC12.07□□□□□ -0.48
Six4Q61321 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Gm29199-201ENSMUST00000187766 775 ntBASIC12.07□□□□□ -0.48
Six4Q61321 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.07□□□□□ -0.48
Six4Q61321 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.07□□□□□ -0.48
Six4Q61321 Gm19287-201ENSMUST00000203190 358 ntBASIC12.07□□□□□ -0.48
Six4Q61321 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Six4Q61321 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.07□□□□□ -0.48
Six4Q61321 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Six4Q61321 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.07□□□□□ -0.48
Six4Q61321 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.07□□□□□ -0.48
Six4Q61321 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.07□□□□□ -0.48
Six4Q61321 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Six4Q61321 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Six4Q61321 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Six4Q61321 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.07□□□□□ -0.48
Six4Q61321 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.07□□□□□ -0.48
Six4Q61321 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.07□□□□□ -0.48
Six4Q61321 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Six4Q61321 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.07□□□□□ -0.48
Six4Q61321 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Six4Q61321 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.06□□□□□ -0.48
Six4Q61321 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Six4Q61321 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.06□□□□□ -0.48
Six4Q61321 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Six4Q61321 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 Gm23200-201ENSMUST00000104379 132 ntBASIC12.06□□□□□ -0.48
Six4Q61321 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Six4Q61321 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.06□□□□□ -0.48
Six4Q61321 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.06□□□□□ -0.48
Six4Q61321 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.06□□□□□ -0.48
Six4Q61321 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Six4Q61321 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.06□□□□□ -0.48
Six4Q61321 Gm43184-201ENSMUST00000197247 542 ntBASIC12.06□□□□□ -0.48
Six4Q61321 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.06□□□□□ -0.48
Six4Q61321 Gm18038-201ENSMUST00000197900 485 ntBASIC12.06□□□□□ -0.48
Six4Q61321 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms