Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav3-3Q5R1C3 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Gm42971-201ENSMUST00000199228 2079 ntBASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Gm13223-201ENSMUST00000118609 747 ntBASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Gm15920-201ENSMUST00000118998 402 ntBASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Gm24694-201ENSMUST00000180054 110 ntBASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Gm9522-201ENSMUST00000182394 926 ntBASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Gm27663-201ENSMUST00000184839 110 ntBASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Gm43094-201ENSMUST00000196549 921 ntBASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Gm42550-201ENSMUST00000201553 960 ntBASIC9□□□□□ -0.97
Trav3-3Q5R1C3 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Gm9797-201ENSMUST00000052902 613 ntBASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Gm8420-201ENSMUST00000097103 598 ntBASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Gm15222-202ENSMUST00000228667 1726 ntBASIC9□□□□□ -0.97
Trav3-3Q5R1C3 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Gm37969-201ENSMUST00000195777 3409 ntBASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav3-3Q5R1C3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms