Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Myo7a-202ENSMUST00000107122 6867 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Rab11b-201ENSMUST00000057373 6109 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC9.82□□□□□ -0.84
Trim63Q38HM4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC9.82□□□□□ -0.84
Trim63Q38HM4 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Gm27631-201ENSMUST00000184163 466 ntBASIC9.82□□□□□ -0.84
Trim63Q38HM4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.82□□□□□ -0.84
Trim63Q38HM4 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Gm43760-201ENSMUST00000202120 3015 ntBASIC9.82□□□□□ -0.84
Trim63Q38HM4 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC9.82□□□□□ -0.84
Trim63Q38HM4 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC9.81□□□□□ -0.84
Trim63Q38HM4 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Gm26751-201ENSMUST00000181218 4245 ntTSL 5 BASIC9.81□□□□□ -0.84
Trim63Q38HM4 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Gm13597-201ENSMUST00000121239 375 ntBASIC9.81□□□□□ -0.84
Trim63Q38HM4 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC9.81□□□□□ -0.84
Trim63Q38HM4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Gm21470-201ENSMUST00000187680 696 ntBASIC9.81□□□□□ -0.84
Trim63Q38HM4 Gm18916-201ENSMUST00000198264 1246 ntBASIC9.81□□□□□ -0.84
Trim63Q38HM4 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Gm6916-202ENSMUST00000205523 195 ntBASIC9.81□□□□□ -0.84
Trim63Q38HM4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 AC126262.1-201ENSMUST00000221802 1904 ntBASIC9.81□□□□□ -0.84
Trim63Q38HM4 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Tm4sf1-201ENSMUST00000029376 1436 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trim63Q38HM4 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms