Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn3Q07409 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.59□□□□□ -0.39
Cntn3Q07409 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.59□□□□□ -0.39
Cntn3Q07409 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.59□□□□□ -0.39
Cntn3Q07409 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn3Q07409 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn3Q07409 Gm3786-201ENSMUST00000202659 378 ntBASIC12.59□□□□□ -0.39
Cntn3Q07409 Gm4607-201ENSMUST00000206649 577 ntBASIC12.59□□□□□ -0.39
Cntn3Q07409 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.59□□□□□ -0.39
Cntn3Q07409 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn3Q07409 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn3Q07409 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.59□□□□□ -0.39
Cntn3Q07409 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.59□□□□□ -0.39
Cntn3Q07409 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cntn3Q07409 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.59□□□□□ -0.39
Cntn3Q07409 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn3Q07409 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cntn3Q07409 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn3Q07409 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cntn3Q07409 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn3Q07409 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn3Q07409 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn3Q07409 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.59□□□□□ -0.39
Cntn3Q07409 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn3Q07409 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cntn3Q07409 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.59□□□□□ -0.39
Cntn3Q07409 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.58□□□□□ -0.39
Cntn3Q07409 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cntn3Q07409 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.39
Cntn3Q07409 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn3Q07409 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn3Q07409 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.58□□□□□ -0.4
Cntn3Q07409 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.58□□□□□ -0.4
Cntn3Q07409 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn3Q07409 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn3Q07409 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cntn3Q07409 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.58□□□□□ -0.4
Cntn3Q07409 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn3Q07409 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.58□□□□□ -0.4
Cntn3Q07409 Gm11511-201ENSMUST00000118146 540 ntBASIC12.58□□□□□ -0.4
Cntn3Q07409 Gm11331-201ENSMUST00000119764 288 ntBASIC12.58□□□□□ -0.4
Cntn3Q07409 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.58□□□□□ -0.4
Cntn3Q07409 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.58□□□□□ -0.4
Cntn3Q07409 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn3Q07409 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn3Q07409 Gm43184-201ENSMUST00000197247 542 ntBASIC12.58□□□□□ -0.4
Cntn3Q07409 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn3Q07409 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.58□□□□□ -0.4
Cntn3Q07409 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.58□□□□□ -0.4
Cntn3Q07409 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.58□□□□□ -0.4
Cntn3Q07409 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Cntn3Q07409 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn3Q07409 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn3Q07409 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn3Q07409 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn3Q07409 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn3Q07409 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn3Q07409 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cntn3Q07409 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn3Q07409 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn3Q07409 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cntn3Q07409 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn3Q07409 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn3Q07409 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn3Q07409 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn3Q07409 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn3Q07409 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cntn3Q07409 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cntn3Q07409 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.57□□□□□ -0.4
Cntn3Q07409 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.57□□□□□ -0.4
Cntn3Q07409 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.57□□□□□ -0.4
Cntn3Q07409 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Gm15515-201ENSMUST00000117827 822 ntBASIC12.57□□□□□ -0.4
Cntn3Q07409 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.57□□□□□ -0.4
Cntn3Q07409 Gm14247-201ENSMUST00000120950 237 ntBASIC12.57□□□□□ -0.4
Cntn3Q07409 Gm11450-201ENSMUST00000121144 333 ntBASIC12.57□□□□□ -0.4
Cntn3Q07409 Gm12164-201ENSMUST00000121695 551 ntBASIC12.57□□□□□ -0.4
Cntn3Q07409 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.57□□□□□ -0.4
Cntn3Q07409 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.57□□□□□ -0.4
Cntn3Q07409 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.57□□□□□ -0.4
Cntn3Q07409 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cntn3Q07409 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.57□□□□□ -0.4
Cntn3Q07409 Gm37986-201ENSMUST00000193285 383 ntBASIC12.57□□□□□ -0.4
Cntn3Q07409 Gm35960-201ENSMUST00000202712 767 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms