Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.36□□□□□ -0.43
Trim43bP86448 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim43bP86448 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43bP86448 Gm14726-201ENSMUST00000120623 896 ntBASIC12.36□□□□□ -0.43
Trim43bP86448 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43bP86448 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43bP86448 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43bP86448 Rmrp-201ENSMUST00000157463 271 ntBASIC12.36□□□□□ -0.43
Trim43bP86448 Gm25668-201ENSMUST00000157700 129 ntBASIC12.36□□□□□ -0.43
Trim43bP86448 Gm2991-201ENSMUST00000173338 480 ntBASIC12.36□□□□□ -0.43
Trim43bP86448 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43bP86448 Gm26956-201ENSMUST00000182176 986 ntBASIC12.36□□□□□ -0.43
Trim43bP86448 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim43bP86448 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.36□□□□□ -0.43
Trim43bP86448 Gm6621-201ENSMUST00000193251 772 ntBASIC12.36□□□□□ -0.43
Trim43bP86448 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.36□□□□□ -0.43
Trim43bP86448 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.36□□□□□ -0.43
Trim43bP86448 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43bP86448 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim43bP86448 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim43bP86448 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43bP86448 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43bP86448 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trim43bP86448 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43bP86448 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.36□□□□□ -0.43
Trim43bP86448 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim43bP86448 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim43bP86448 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim43bP86448 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.35□□□□□ -0.43
Trim43bP86448 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.35□□□□□ -0.43
Trim43bP86448 Gm24255-201ENSMUST00000104481 128 ntBASIC12.35□□□□□ -0.43
Trim43bP86448 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.35□□□□□ -0.43
Trim43bP86448 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.35□□□□□ -0.43
Trim43bP86448 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.35□□□□□ -0.43
Trim43bP86448 Gm20482-202ENSMUST00000174729 825 ntBASIC12.35□□□□□ -0.43
Trim43bP86448 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.35□□□□□ -0.43
Trim43bP86448 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trim43bP86448 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim43bP86448 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trim43bP86448 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim43bP86448 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim43bP86448 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim43bP86448 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim43bP86448 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim43bP86448 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim43bP86448 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.34□□□□□ -0.43
Trim43bP86448 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim43bP86448 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
Trim43bP86448 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trim43bP86448 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim43bP86448 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim43bP86448 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.34□□□□□ -0.43
Trim43bP86448 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim43bP86448 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.34□□□□□ -0.43
Trim43bP86448 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43bP86448 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim43bP86448 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.34□□□□□ -0.43
Trim43bP86448 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.34□□□□□ -0.43
Trim43bP86448 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trim43bP86448 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms