Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Otx1P80205 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Otx1P80205 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.36□□□□□ -0.75
Otx1P80205 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.36□□□□□ -0.75
Otx1P80205 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Otx1P80205 Gm32999-201ENSMUST00000192693 562 ntBASIC10.36□□□□□ -0.75
Otx1P80205 AA914427-201ENSMUST00000193194 1166 ntBASIC10.36□□□□□ -0.75
Otx1P80205 Gm38317-201ENSMUST00000195564 343 ntBASIC10.36□□□□□ -0.75
Otx1P80205 Gm18893-201ENSMUST00000198416 943 ntBASIC10.36□□□□□ -0.75
Otx1P80205 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.36□□□□□ -0.75
Otx1P80205 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Gzmn-202ENSMUST00000225535 989 ntBASIC10.36□□□□□ -0.75
Otx1P80205 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.36□□□□□ -0.75
Otx1P80205 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Otx1P80205 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.36□□□□□ -0.75
Otx1P80205 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.36□□□□□ -0.75
Otx1P80205 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Otx1P80205 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Otx1P80205 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Otx1P80205 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otx1P80205 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otx1P80205 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Otx1P80205 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.35□□□□□ -0.75
Otx1P80205 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otx1P80205 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Otx1P80205 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.35□□□□□ -0.75
Otx1P80205 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otx1P80205 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otx1P80205 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.35□□□□□ -0.75
Otx1P80205 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.35□□□□□ -0.75
Otx1P80205 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.35□□□□□ -0.75
Otx1P80205 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otx1P80205 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.35□□□□□ -0.75
Otx1P80205 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otx1P80205 Gm11511-201ENSMUST00000118146 540 ntBASIC10.35□□□□□ -0.75
Otx1P80205 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.35□□□□□ -0.75
Otx1P80205 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.35□□□□□ -0.75
Otx1P80205 Gm15276-201ENSMUST00000145953 498 ntBASIC10.35□□□□□ -0.75
Otx1P80205 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.35□□□□□ -0.75
Otx1P80205 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.35□□□□□ -0.75
Otx1P80205 Gm18753-201ENSMUST00000201000 566 ntBASIC10.35□□□□□ -0.75
Otx1P80205 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.35□□□□□ -0.75
Otx1P80205 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.35□□□□□ -0.75
Otx1P80205 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.35□□□□□ -0.75
Otx1P80205 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otx1P80205 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otx1P80205 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.35□□□□□ -0.75
Otx1P80205 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otx1P80205 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otx1P80205 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otx1P80205 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otx1P80205 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otx1P80205 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.35□□□□□ -0.75
Otx1P80205 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.35□□□□□ -0.75
Otx1P80205 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otx1P80205 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Otx1P80205 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otx1P80205 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otx1P80205 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Otx1P80205 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otx1P80205 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.35□□□□□ -0.75
Otx1P80205 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.35□□□□□ -0.75
Otx1P80205 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.35□□□□□ -0.75
Otx1P80205 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otx1P80205 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otx1P80205 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Otx1P80205 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms