Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Tpm1P58771 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm1P58771 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Tpm1P58771 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm1P58771 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm1P58771 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm1P58771 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm1P58771 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm1P58771 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm1P58771 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Tpm1P58771 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Tpm1P58771 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm1P58771 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm1P58771 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Tpm1P58771 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm1P58771 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm1P58771 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm1P58771 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Tpm1P58771 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm1P58771 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm1P58771 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Tpm1P58771 Btrc-209ENSMUST00000224478 2194 ntBASIC13.35□□□□□ -0.27
Tpm1P58771 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.35□□□□□ -0.27
Tpm1P58771 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm1P58771 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm1P58771 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm1P58771 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm1P58771 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC13.35□□□□□ -0.27
Tpm1P58771 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Tpm1P58771 Gm43963-201ENSMUST00000203466 2488 ntBASIC13.35□□□□□ -0.27
Tpm1P58771 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Tpm1P58771 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Tpm1P58771 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm1P58771 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm1P58771 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm1P58771 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm1P58771 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm1P58771 Gm7642-201ENSMUST00000216345 1809 ntBASIC13.35□□□□□ -0.27
Tpm1P58771 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm1P58771 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Tpm1P58771 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm1P58771 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm1P58771 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm1P58771 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.35□□□□□ -0.27
Tpm1P58771 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm1P58771 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.35□□□□□ -0.27
Tpm1P58771 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
Tpm1P58771 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm1P58771 Gm6180-201ENSMUST00000065243 498 ntBASIC13.35□□□□□ -0.27
Tpm1P58771 Gm22058-201ENSMUST00000083393 310 ntBASIC13.35□□□□□ -0.27
Tpm1P58771 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm1P58771 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm1P58771 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Tpm1P58771 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Tpm1P58771 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm1P58771 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm1P58771 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm1P58771 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm1P58771 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tpm1P58771 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Tpm1P58771 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm1P58771 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm1P58771 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Tpm1P58771 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Tpm1P58771 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm1P58771 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Tpm1P58771 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Tpm1P58771 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm1P58771 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tpm1P58771 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm1P58771 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm1P58771 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.34□□□□□ -0.27
Tpm1P58771 Gm24830-201ENSMUST00000102024 166 ntBASIC13.34□□□□□ -0.27
Tpm1P58771 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm1P58771 Gm12314-201ENSMUST00000118104 538 ntBASIC13.34□□□□□ -0.27
Tpm1P58771 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.34□□□□□ -0.27
Tpm1P58771 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.34□□□□□ -0.27
Tpm1P58771 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm1P58771 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Tpm1P58771 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.34□□□□□ -0.27
Tpm1P58771 Gm8652-201ENSMUST00000181363 964 ntBASIC13.34□□□□□ -0.27
Tpm1P58771 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.34□□□□□ -0.27
Tpm1P58771 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.34□□□□□ -0.27
Tpm1P58771 Gm9908-201ENSMUST00000211534 448 ntBASIC13.34□□□□□ -0.27
Tpm1P58771 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm1P58771 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Tpm1P58771 Gm26232-201ENSMUST00000083360 166 ntBASIC13.34□□□□□ -0.27
Tpm1P58771 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.34□□□□□ -0.27
Tpm1P58771 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm1P58771 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm1P58771 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm1P58771 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm1P58771 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm1P58771 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Tpm1P58771 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm1P58771 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm1P58771 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tpm1P58771 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tpm1P58771 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Tpm1P58771 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms