Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox3P53784 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Sox3P53784 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox3P53784 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox3P53784 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox3P53784 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox3P53784 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox3P53784 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Sox3P53784 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox3P53784 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox3P53784 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox3P53784 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox3P53784 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Sox3P53784 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Sox3P53784 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox3P53784 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox3P53784 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.53□□□□□ -0.56
Sox3P53784 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox3P53784 Gm23949-201ENSMUST00000104027 127 ntBASIC11.53□□□□□ -0.56
Sox3P53784 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.53□□□□□ -0.56
Sox3P53784 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.53□□□□□ -0.56
Sox3P53784 Gm13736-201ENSMUST00000119272 253 ntBASIC11.53□□□□□ -0.56
Sox3P53784 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.53□□□□□ -0.56
Sox3P53784 Gm37201-201ENSMUST00000191845 523 ntBASIC11.53□□□□□ -0.56
Sox3P53784 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.53□□□□□ -0.56
Sox3P53784 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Sox3P53784 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.53□□□□□ -0.56
Sox3P53784 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox3P53784 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox3P53784 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox3P53784 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Sox3P53784 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox3P53784 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox3P53784 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox3P53784 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox3P53784 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox3P53784 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox3P53784 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox3P53784 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Sox3P53784 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Sox3P53784 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.52□□□□□ -0.56
Sox3P53784 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Sox3P53784 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox3P53784 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox3P53784 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Sox3P53784 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox3P53784 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox3P53784 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox3P53784 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Sox3P53784 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Sox3P53784 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox3P53784 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox3P53784 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox3P53784 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox3P53784 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Sox3P53784 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox3P53784 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.52□□□□□ -0.57
Sox3P53784 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox3P53784 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox3P53784 Map1b-203ENSMUST00000223725 2669 ntBASIC11.52□□□□□ -0.57
Sox3P53784 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox3P53784 Gm15515-201ENSMUST00000117827 822 ntBASIC11.52□□□□□ -0.57
Sox3P53784 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox3P53784 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.52□□□□□ -0.57
Sox3P53784 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.52□□□□□ -0.57
Sox3P53784 Gm23153-201ENSMUST00000175323 313 ntBASIC11.52□□□□□ -0.57
Sox3P53784 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.52□□□□□ -0.57
Sox3P53784 Gm29615-201ENSMUST00000185371 697 ntBASIC11.52□□□□□ -0.57
Sox3P53784 Gm28224-201ENSMUST00000186078 697 ntBASIC11.52□□□□□ -0.57
Sox3P53784 Gm29001-201ENSMUST00000186177 697 ntBASIC11.52□□□□□ -0.57
Sox3P53784 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.52□□□□□ -0.57
Sox3P53784 Gm28292-201ENSMUST00000186593 697 ntBASIC11.52□□□□□ -0.57
Sox3P53784 Gm28101-201ENSMUST00000187608 697 ntBASIC11.52□□□□□ -0.57
Sox3P53784 Gm29076-201ENSMUST00000187689 697 ntBASIC11.52□□□□□ -0.57
Sox3P53784 Gm28302-201ENSMUST00000187931 697 ntBASIC11.52□□□□□ -0.57
Sox3P53784 Gm28646-201ENSMUST00000188220 697 ntBASIC11.52□□□□□ -0.57
Sox3P53784 Gm28205-201ENSMUST00000189177 697 ntBASIC11.52□□□□□ -0.57
Sox3P53784 Gm29032-201ENSMUST00000189797 697 ntBASIC11.52□□□□□ -0.57
Sox3P53784 Gm28695-201ENSMUST00000190300 697 ntBASIC11.52□□□□□ -0.57
Sox3P53784 Gm37448-201ENSMUST00000192795 697 ntBASIC11.52□□□□□ -0.57
Sox3P53784 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.57
Sox3P53784 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Sox3P53784 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Sox3P53784 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.52□□□□□ -0.57
Sox3P53784 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.52□□□□□ -0.57
Sox3P53784 Gm45925-201ENSMUST00000218882 744 ntBASIC11.52□□□□□ -0.57
Sox3P53784 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.52□□□□□ -0.57
Sox3P53784 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.52□□□□□ -0.57
Sox3P53784 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox3P53784 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox3P53784 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox3P53784 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms