Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hnf4aP49698 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Hnf4aP49698 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Hnf4aP49698 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Hnf4aP49698 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hnf4aP49698 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hnf4aP49698 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.63□□□□□ -0.55
Hnf4aP49698 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hnf4aP49698 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hnf4aP49698 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Hnf4aP49698 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hnf4aP49698 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Hnf4aP49698 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Hnf4aP49698 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hnf4aP49698 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hnf4aP49698 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hnf4aP49698 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hnf4aP49698 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hnf4aP49698 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hnf4aP49698 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hnf4aP49698 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Hnf4aP49698 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.63□□□□□ -0.55
Hnf4aP49698 Gm14644-201ENSMUST00000116671 647 ntBASIC11.63□□□□□ -0.55
Hnf4aP49698 Gm12015-201ENSMUST00000117065 843 ntBASIC11.63□□□□□ -0.55
Hnf4aP49698 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hnf4aP49698 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hnf4aP49698 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.63□□□□□ -0.55
Hnf4aP49698 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.63□□□□□ -0.55
Hnf4aP49698 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hnf4aP49698 Gm9230-201ENSMUST00000188228 532 ntBASIC11.63□□□□□ -0.55
Hnf4aP49698 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.63□□□□□ -0.55
Hnf4aP49698 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Hnf4aP49698 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hnf4aP49698 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Hnf4aP49698 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.63□□□□□ -0.55
Hnf4aP49698 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.63□□□□□ -0.55
Hnf4aP49698 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hnf4aP49698 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hnf4aP49698 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hnf4aP49698 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Hnf4aP49698 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Hnf4aP49698 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hnf4aP49698 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hnf4aP49698 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Hnf4aP49698 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Hnf4aP49698 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.63□□□□□ -0.55
Hnf4aP49698 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Hnf4aP49698 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Hnf4aP49698 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hnf4aP49698 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.62□□□□□ -0.55
Hnf4aP49698 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hnf4aP49698 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hnf4aP49698 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Hnf4aP49698 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hnf4aP49698 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hnf4aP49698 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hnf4aP49698 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Hnf4aP49698 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hnf4aP49698 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hnf4aP49698 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.62□□□□□ -0.55
Hnf4aP49698 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.62□□□□□ -0.55
Hnf4aP49698 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Hnf4aP49698 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hnf4aP49698 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Hnf4aP49698 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hnf4aP49698 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hnf4aP49698 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Hnf4aP49698 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.62□□□□□ -0.55
Hnf4aP49698 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hnf4aP49698 Gm11930-201ENSMUST00000117788 190 ntBASIC11.62□□□□□ -0.55
Hnf4aP49698 Gm15610-201ENSMUST00000120584 195 ntBASIC11.62□□□□□ -0.55
Hnf4aP49698 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.62□□□□□ -0.55
Hnf4aP49698 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hnf4aP49698 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hnf4aP49698 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Hnf4aP49698 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.62□□□□□ -0.55
Hnf4aP49698 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.62□□□□□ -0.55
Hnf4aP49698 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Hnf4aP49698 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Hnf4aP49698 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.62□□□□□ -0.55
Hnf4aP49698 Mir8109-201ENSMUST00000184375 117 ntBASIC11.62□□□□□ -0.55
Hnf4aP49698 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.62□□□□□ -0.55
Hnf4aP49698 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hnf4aP49698 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.62□□□□□ -0.55
Hnf4aP49698 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hnf4aP49698 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Hnf4aP49698 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hnf4aP49698 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hnf4aP49698 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hnf4aP49698 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hnf4aP49698 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hnf4aP49698 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hnf4aP49698 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hnf4aP49698 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Hnf4aP49698 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hnf4aP49698 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.62□□□□□ -0.55
Hnf4aP49698 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hnf4aP49698 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hnf4aP49698 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hnf4aP49698 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms