Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Rpl28P41105 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Rpl28P41105 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Rpl28P41105 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Rpl28P41105 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Rpl28P41105 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Rpl28P41105 Gm45428-201ENSMUST00000209619 1789 ntBASIC8.07□□□□□ -1.12
Rpl28P41105 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC8.07□□□□□ -1.12
Rpl28P41105 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC8.07□□□□□ -1.12
Rpl28P41105 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Gm42141-201ENSMUST00000196534 2172 ntBASIC8.07□□□□□ -1.12
Rpl28P41105 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC8.07□□□□□ -1.12
Rpl28P41105 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
Rpl28P41105 Gm6992-201ENSMUST00000217973 1607 ntBASIC8.07□□□□□ -1.12
Rpl28P41105 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Rpl28P41105 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC8.06□□□□□ -1.12
Rpl28P41105 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
Rpl28P41105 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC8.06□□□□□ -1.12
Rpl28P41105 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Rpl28P41105 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Rpl28P41105 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Rpl28P41105 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC8.06□□□□□ -1.12
Rpl28P41105 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC8.06□□□□□ -1.12
Rpl28P41105 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Rpl28P41105 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC8.06□□□□□ -1.12
Rpl28P41105 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
Rpl28P41105 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Gm27331-201ENSMUST00000183705 60 ntBASIC8.06□□□□□ -1.12
Rpl28P41105 Gm37748-201ENSMUST00000194379 1140 ntBASIC8.06□□□□□ -1.12
Rpl28P41105 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Rpl28P41105 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC8.06□□□□□ -1.12
Rpl28P41105 Gm44882-201ENSMUST00000205702 802 ntBASIC8.06□□□□□ -1.12
Rpl28P41105 Gm5035-201ENSMUST00000215581 927 ntBASIC8.06□□□□□ -1.12
Rpl28P41105 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC8.06□□□□□ -1.12
Rpl28P41105 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Gm19163-201ENSMUST00000223313 780 ntBASIC8.06□□□□□ -1.12
Rpl28P41105 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Rpl28P41105 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
Rpl28P41105 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Rpl28P41105 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Rpl28P41105 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Rpl28P41105 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl28P41105 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl28P41105 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC8.05□□□□□ -1.12
Rpl28P41105 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl28P41105 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl28P41105 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl28P41105 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms