Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.97□□□□□ -0.49
Nckap1P28660 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.97□□□□□ -0.49
Nckap1P28660 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.97□□□□□ -0.49
Nckap1P28660 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.97□□□□□ -0.49
Nckap1P28660 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.97□□□□□ -0.49
Nckap1P28660 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Nckap1P28660 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.97□□□□□ -0.49
Nckap1P28660 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.97□□□□□ -0.49
Nckap1P28660 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Nckap1P28660 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Nckap1P28660 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.97□□□□□ -0.49
Nckap1P28660 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.97□□□□□ -0.49
Nckap1P28660 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Nckap1P28660 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.96□□□□□ -0.49
Nckap1P28660 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Nckap1P28660 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.96□□□□□ -0.49
Nckap1P28660 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nckap1P28660 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nckap1P28660 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.96□□□□□ -0.49
Nckap1P28660 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nckap1P28660 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nckap1P28660 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nckap1P28660 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nckap1P28660 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nckap1P28660 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nckap1P28660 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nckap1P28660 Gm13809-201ENSMUST00000117921 597 ntBASIC11.96□□□□□ -0.49
Nckap1P28660 Gm14247-201ENSMUST00000120950 237 ntBASIC11.96□□□□□ -0.49
Nckap1P28660 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nckap1P28660 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.96□□□□□ -0.49
Nckap1P28660 Gm10774-201ENSMUST00000188689 204 ntBASIC11.96□□□□□ -0.49
Nckap1P28660 Gm45770-201ENSMUST00000212105 616 ntBASIC11.96□□□□□ -0.49
Nckap1P28660 Gm2553-201ENSMUST00000215986 605 ntBASIC11.96□□□□□ -0.49
Nckap1P28660 Gm9797-202ENSMUST00000218003 294 ntBASIC11.96□□□□□ -0.49
Nckap1P28660 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nckap1P28660 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nckap1P28660 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nckap1P28660 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nckap1P28660 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.96□□□□□ -0.49
Nckap1P28660 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nckap1P28660 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nckap1P28660 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nckap1P28660 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.5
Nckap1P28660 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Nckap1P28660 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nckap1P28660 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nckap1P28660 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nckap1P28660 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nckap1P28660 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nckap1P28660 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.95□□□□□ -0.5
Nckap1P28660 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.95□□□□□ -0.5
Nckap1P28660 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nckap1P28660 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.95□□□□□ -0.5
Nckap1P28660 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nckap1P28660 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nckap1P28660 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.95□□□□□ -0.5
Nckap1P28660 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nckap1P28660 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nckap1P28660 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nckap1P28660 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nckap1P28660 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nckap1P28660 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nckap1P28660 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nckap1P28660 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nckap1P28660 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.95□□□□□ -0.5
Nckap1P28660 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.95□□□□□ -0.5
Nckap1P28660 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nckap1P28660 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nckap1P28660 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nckap1P28660 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.95□□□□□ -0.5
Nckap1P28660 Gm5419-201ENSMUST00000119301 527 ntBASIC11.95□□□□□ -0.5
Nckap1P28660 Gm13461-201ENSMUST00000120980 662 ntBASIC11.95□□□□□ -0.5
Nckap1P28660 Gm12164-201ENSMUST00000121695 551 ntBASIC11.95□□□□□ -0.5
Nckap1P28660 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.95□□□□□ -0.5
Nckap1P28660 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nckap1P28660 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.95□□□□□ -0.5
Nckap1P28660 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nckap1P28660 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.95□□□□□ -0.5
Nckap1P28660 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.95□□□□□ -0.5
Nckap1P28660 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.95□□□□□ -0.5
Nckap1P28660 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nckap1P28660 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nckap1P28660 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nckap1P28660 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nckap1P28660 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nckap1P28660 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nckap1P28660 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nckap1P28660 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms