Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.01□□□□□ -0.81
Col8a2P25318 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.01□□□□□ -0.81
Col8a2P25318 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Col8a2P25318 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Col8a2P25318 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Col8a2P25318 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Col8a2P25318 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10□□□□□ -0.81
Col8a2P25318 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10□□□□□ -0.81
Col8a2P25318 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10□□□□□ -0.81
Col8a2P25318 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC10□□□□□ -0.81
Col8a2P25318 Gm15004-201ENSMUST00000119192 630 ntBASIC10□□□□□ -0.81
Col8a2P25318 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10□□□□□ -0.81
Col8a2P25318 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC10□□□□□ -0.81
Col8a2P25318 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC10□□□□□ -0.81
Col8a2P25318 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Col8a2P25318 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC10□□□□□ -0.81
Col8a2P25318 Gm5732-201ENSMUST00000182596 1007 ntBASIC10□□□□□ -0.81
Col8a2P25318 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10□□□□□ -0.81
Col8a2P25318 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC10□□□□□ -0.81
Col8a2P25318 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC10□□□□□ -0.81
Col8a2P25318 Nupl1-206ENSMUST00000225111 2936 ntBASIC10□□□□□ -0.81
Col8a2P25318 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Gm43463-201ENSMUST00000195967 1803 ntBASIC10□□□□□ -0.81
Col8a2P25318 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Col8a2P25318 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Col8a2P25318 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC9.99□□□□□ -0.81
Col8a2P25318 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Col8a2P25318 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col8a2P25318 Gm43807-201ENSMUST00000200678 1781 ntBASIC9.99□□□□□ -0.81
Col8a2P25318 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col8a2P25318 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Col8a2P25318 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col8a2P25318 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.99□□□□□ -0.81
Col8a2P25318 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Col8a2P25318 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col8a2P25318 Mir680-2-201ENSMUST00000102163 110 ntBASIC9.99□□□□□ -0.81
Col8a2P25318 Gm23251-201ENSMUST00000103773 110 ntBASIC9.99□□□□□ -0.81
Col8a2P25318 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
Col8a2P25318 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col8a2P25318 Gm13035-201ENSMUST00000117496 342 ntBASIC9.99□□□□□ -0.81
Col8a2P25318 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col8a2P25318 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col8a2P25318 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC9.99□□□□□ -0.81
Col8a2P25318 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC9.99□□□□□ -0.81
Col8a2P25318 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC9.99□□□□□ -0.81
Col8a2P25318 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC9.99□□□□□ -0.81
Col8a2P25318 Gm18038-201ENSMUST00000197900 485 ntBASIC9.99□□□□□ -0.81
Col8a2P25318 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Col8a2P25318 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col8a2P25318 Gm9785-201ENSMUST00000062642 1006 ntBASIC9.99□□□□□ -0.81
Col8a2P25318 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col8a2P25318 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col8a2P25318 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col8a2P25318 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Col8a2P25318 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col8a2P25318 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col8a2P25318 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col8a2P25318 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col8a2P25318 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col8a2P25318 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Col8a2P25318 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Col8a2P25318 Gm43081-201ENSMUST00000199082 1380 ntBASIC9.99□□□□□ -0.81
Col8a2P25318 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Col8a2P25318 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms