Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC9.73□□□□□ -0.85
Cdx1P18111 Gm29705-201ENSMUST00000212598 474 ntBASIC9.73□□□□□ -0.85
Cdx1P18111 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC9.73□□□□□ -0.85
Cdx1P18111 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Gm7399-201ENSMUST00000032395 858 ntBASIC9.73□□□□□ -0.85
Cdx1P18111 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Cdx1P18111 Olfr582-201ENSMUST00000098212 960 ntBASIC9.73□□□□□ -0.85
Cdx1P18111 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Gm5766-201ENSMUST00000160520 1977 ntBASIC9.73□□□□□ -0.85
Cdx1P18111 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC9.73□□□□□ -0.85
Cdx1P18111 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC9.73□□□□□ -0.85
Cdx1P18111 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Cdx1P18111 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Cdx1P18111 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.72□□□□□ -0.85
Cdx1P18111 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Gm15770-201ENSMUST00000117498 584 ntBASIC9.72□□□□□ -0.85
Cdx1P18111 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC9.72□□□□□ -0.85
Cdx1P18111 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC9.72□□□□□ -0.85
Cdx1P18111 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC9.72□□□□□ -0.85
Cdx1P18111 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC9.72□□□□□ -0.85
Cdx1P18111 Gm8598-201ENSMUST00000221184 836 ntBASIC9.72□□□□□ -0.85
Cdx1P18111 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC9.72□□□□□ -0.85
Cdx1P18111 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Gm11661-201ENSMUST00000121761 1327 ntBASIC9.72□□□□□ -0.85
Cdx1P18111 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC9.72□□□□□ -0.85
Cdx1P18111 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Cdx1P18111 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Cdx1P18111 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Cdx1P18111 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Cdx1P18111 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cdx1P18111 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx1P18111 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC9.71□□□□□ -0.85
Cdx1P18111 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx1P18111 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx1P18111 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Cdx1P18111 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx1P18111 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC9.71□□□□□ -0.85
Cdx1P18111 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx1P18111 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx1P18111 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx1P18111 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC9.71□□□□□ -0.85
Cdx1P18111 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx1P18111 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx1P18111 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx1P18111 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx1P18111 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx1P18111 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx1P18111 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cdx1P18111 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx1P18111 Gm23931-201ENSMUST00000103842 109 ntBASIC9.71□□□□□ -0.86
Cdx1P18111 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC9.71□□□□□ -0.86
Cdx1P18111 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Cdx1P18111 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC9.71□□□□□ -0.86
Cdx1P18111 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cdx1P18111 AC073947.2-201ENSMUST00000215888 1130 ntBASIC9.71□□□□□ -0.86
Cdx1P18111 AC155237.1-201ENSMUST00000226196 1279 ntBASIC9.71□□□□□ -0.86
Cdx1P18111 AC131997.1-201ENSMUST00000228611 1229 ntBASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms