Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.28□□□□□ -0.28
Hoxc6P10629 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.28□□□□□ -0.28
Hoxc6P10629 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc6P10629 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc6P10629 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.28□□□□□ -0.28
Hoxc6P10629 AC136376.2-201ENSMUST00000228819 490 ntBASIC13.28□□□□□ -0.28
Hoxc6P10629 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Hoxc6P10629 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Hoxc6P10629 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.28□□□□□ -0.28
Hoxc6P10629 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc6P10629 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc6P10629 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc6P10629 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
Hoxc6P10629 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.28□□□□□ -0.28
Hoxc6P10629 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc6P10629 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc6P10629 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Hoxc6P10629 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Hoxc6P10629 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxc6P10629 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.27□□□□□ -0.28
Hoxc6P10629 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Hoxc6P10629 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxc6P10629 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxc6P10629 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.27□□□□□ -0.28
Hoxc6P10629 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.27□□□□□ -0.28
Hoxc6P10629 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxc6P10629 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxc6P10629 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxc6P10629 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc6P10629 Gm23272-201ENSMUST00000104053 129 ntBASIC13.27□□□□□ -0.29
Hoxc6P10629 Gm11783-201ENSMUST00000119549 885 ntBASIC13.27□□□□□ -0.29
Hoxc6P10629 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.27□□□□□ -0.29
Hoxc6P10629 Gm15744-201ENSMUST00000161734 213 ntBASIC13.27□□□□□ -0.29
Hoxc6P10629 Gm26134-201ENSMUST00000178484 110 ntBASIC13.27□□□□□ -0.29
Hoxc6P10629 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.27□□□□□ -0.29
Hoxc6P10629 Gm45113-201ENSMUST00000207518 165 ntBASIC13.27□□□□□ -0.29
Hoxc6P10629 Gm45120-201ENSMUST00000208880 408 ntBASIC13.27□□□□□ -0.29
Hoxc6P10629 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.27□□□□□ -0.29
Hoxc6P10629 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc6P10629 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Hoxc6P10629 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc6P10629 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Hoxc6P10629 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Hoxc6P10629 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.27□□□□□ -0.29
Hoxc6P10629 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc6P10629 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Hoxc6P10629 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc6P10629 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc6P10629 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc6P10629 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc6P10629 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Hoxc6P10629 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc6P10629 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Hoxc6P10629 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc6P10629 AC166836.1-201ENSMUST00000219933 1795 ntBASIC13.27□□□□□ -0.29
Hoxc6P10629 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
Hoxc6P10629 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc6P10629 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc6P10629 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc6P10629 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc6P10629 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxc6P10629 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc6P10629 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc6P10629 Gm25766-201ENSMUST00000104101 131 ntBASIC13.26□□□□□ -0.29
Hoxc6P10629 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Hoxc6P10629 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc6P10629 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.26□□□□□ -0.29
Hoxc6P10629 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc6P10629 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc6P10629 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc6P10629 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc6P10629 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc6P10629 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.26□□□□□ -0.29
Hoxc6P10629 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.26□□□□□ -0.29
Hoxc6P10629 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc6P10629 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc6P10629 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.26□□□□□ -0.29
Hoxc6P10629 Gm29410-201ENSMUST00000188383 694 ntBASIC13.26□□□□□ -0.29
Hoxc6P10629 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC13.26□□□□□ -0.29
Hoxc6P10629 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.26□□□□□ -0.29
Hoxc6P10629 AC154176.1-201ENSMUST00000225897 220 ntBASIC13.26□□□□□ -0.29
Hoxc6P10629 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.26□□□□□ -0.29
Hoxc6P10629 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc6P10629 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc6P10629 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc6P10629 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc6P10629 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc6P10629 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc6P10629 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc6P10629 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc6P10629 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc6P10629 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc6P10629 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc6P10629 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc6P10629 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.25□□□□□ -0.29
Hoxc6P10629 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.25□□□□□ -0.29
Hoxc6P10629 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc6P10629 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc6P10629 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.25□□□□□ -0.29
Hoxc6P10629 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms