Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Hoxc8P09025 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.69□□□□□ -0.38
Hoxc8P09025 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.69□□□□□ -0.38
Hoxc8P09025 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.69□□□□□ -0.38
Hoxc8P09025 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.69□□□□□ -0.38
Hoxc8P09025 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.69□□□□□ -0.38
Hoxc8P09025 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
Hoxc8P09025 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc8P09025 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Hoxc8P09025 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.69□□□□□ -0.38
Hoxc8P09025 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.69□□□□□ -0.38
Hoxc8P09025 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Hoxc8P09025 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc8P09025 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc8P09025 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc8P09025 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc8P09025 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hoxc8P09025 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.69□□□□□ -0.38
Hoxc8P09025 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc8P09025 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.69□□□□□ -0.38
Hoxc8P09025 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hoxc8P09025 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc8P09025 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hoxc8P09025 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.69□□□□□ -0.38
Hoxc8P09025 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc8P09025 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc8P09025 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxc8P09025 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hoxc8P09025 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc8P09025 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc8P09025 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Hoxc8P09025 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc8P09025 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Hoxc8P09025 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Hoxc8P09025 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Hoxc8P09025 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc8P09025 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc8P09025 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc8P09025 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.68□□□□□ -0.38
Hoxc8P09025 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.68□□□□□ -0.38
Hoxc8P09025 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc8P09025 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc8P09025 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc8P09025 Gm25880-201ENSMUST00000104331 132 ntBASIC12.68□□□□□ -0.38
Hoxc8P09025 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc8P09025 Gm12247-201ENSMUST00000117585 670 ntBASIC12.68□□□□□ -0.38
Hoxc8P09025 Gm11960-201ENSMUST00000122068 925 ntBASIC12.68□□□□□ -0.38
Hoxc8P09025 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc8P09025 Gm7741-201ENSMUST00000181445 989 ntBASIC12.68□□□□□ -0.38
Hoxc8P09025 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc8P09025 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Hoxc8P09025 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.68□□□□□ -0.38
Hoxc8P09025 Gm38314-201ENSMUST00000195709 625 ntBASIC12.68□□□□□ -0.38
Hoxc8P09025 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.68□□□□□ -0.38
Hoxc8P09025 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.68□□□□□ -0.38
Hoxc8P09025 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.68□□□□□ -0.38
Hoxc8P09025 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.68□□□□□ -0.38
Hoxc8P09025 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Hoxc8P09025 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Hoxc8P09025 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc8P09025 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc8P09025 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc8P09025 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc8P09025 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc8P09025 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Hoxc8P09025 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc8P09025 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxc8P09025 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hoxc8P09025 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hoxc8P09025 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hoxc8P09025 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Hoxc8P09025 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Hoxc8P09025 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.67□□□□□ -0.38
Hoxc8P09025 Gm6407-201ENSMUST00000176468 549 ntBASIC12.67□□□□□ -0.38
Hoxc8P09025 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.67□□□□□ -0.38
Hoxc8P09025 Gm8197-202ENSMUST00000193422 934 ntBASIC12.67□□□□□ -0.38
Hoxc8P09025 Gm37826-201ENSMUST00000195329 322 ntBASIC12.67□□□□□ -0.38
Hoxc8P09025 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.67□□□□□ -0.38
Hoxc8P09025 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.67□□□□□ -0.38
Hoxc8P09025 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.67□□□□□ -0.38
Hoxc8P09025 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Hoxc8P09025 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.67□□□□□ -0.38
Hoxc8P09025 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Hoxc8P09025 Gm10263-201ENSMUST00000085163 300 ntBASIC12.67□□□□□ -0.38
Hoxc8P09025 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxc8P09025 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms