Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.34□□□□□ -0.59
ApoeP08226 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.34□□□□□ -0.59
ApoeP08226 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
ApoeP08226 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
ApoeP08226 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.34□□□□□ -0.59
ApoeP08226 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
ApoeP08226 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 Gm12091-201ENSMUST00000146791 830 ntBASIC11.34□□□□□ -0.59
ApoeP08226 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 Gm24644-201ENSMUST00000157114 139 ntBASIC11.34□□□□□ -0.59
ApoeP08226 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.34□□□□□ -0.59
ApoeP08226 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 Gm18711-201ENSMUST00000199341 750 ntBASIC11.34□□□□□ -0.59
ApoeP08226 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.34□□□□□ -0.59
ApoeP08226 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.34□□□□□ -0.59
ApoeP08226 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 Gm5356-201ENSMUST00000093326 615 ntBASIC11.34□□□□□ -0.59
ApoeP08226 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.34□□□□□ -0.59
ApoeP08226 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
ApoeP08226 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
ApoeP08226 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ApoeP08226 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
ApoeP08226 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.33□□□□□ -0.6
ApoeP08226 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
ApoeP08226 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
ApoeP08226 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
ApoeP08226 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.33□□□□□ -0.6
ApoeP08226 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.33□□□□□ -0.6
ApoeP08226 Mir6977-201ENSMUST00000184960 64 ntBASIC11.33□□□□□ -0.6
ApoeP08226 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
ApoeP08226 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Gm18584-201ENSMUST00000203098 964 ntBASIC11.33□□□□□ -0.6
ApoeP08226 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.33□□□□□ -0.6
ApoeP08226 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
ApoeP08226 Gm45384-201ENSMUST00000210451 277 ntBASIC11.33□□□□□ -0.6
ApoeP08226 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
ApoeP08226 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
ApoeP08226 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
ApoeP08226 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.33□□□□□ -0.6
ApoeP08226 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ApoeP08226 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.33□□□□□ -0.6
ApoeP08226 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ApoeP08226 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms