Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10□□□□□ -0.81
CfdP03953 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10□□□□□ -0.81
CfdP03953 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
CfdP03953 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
CfdP03953 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
CfdP03953 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
CfdP03953 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
CfdP03953 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CfdP03953 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10□□□□□ -0.81
CfdP03953 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10□□□□□ -0.81
CfdP03953 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
CfdP03953 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CfdP03953 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10□□□□□ -0.81
CfdP03953 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10□□□□□ -0.81
CfdP03953 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10□□□□□ -0.81
CfdP03953 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
CfdP03953 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10□□□□□ -0.81
CfdP03953 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10□□□□□ -0.81
CfdP03953 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10□□□□□ -0.81
CfdP03953 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10□□□□□ -0.81
CfdP03953 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CfdP03953 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
CfdP03953 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.81
CfdP03953 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CfdP03953 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
CfdP03953 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
CfdP03953 Gm43242-201ENSMUST00000199507 1776 ntBASIC10□□□□□ -0.81
CfdP03953 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
CfdP03953 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10□□□□□ -0.81
CfdP03953 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CfdP03953 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
CfdP03953 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CfdP03953 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10□□□□□ -0.81
CfdP03953 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
CfdP03953 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CfdP03953 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CfdP03953 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CfdP03953 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
CfdP03953 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10□□□□□ -0.81
CfdP03953 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
CfdP03953 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10□□□□□ -0.81
CfdP03953 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10□□□□□ -0.81
CfdP03953 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10□□□□□ -0.81
CfdP03953 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CfdP03953 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CfdP03953 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CfdP03953 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
CfdP03953 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
CfdP03953 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.99□□□□□ -0.81
CfdP03953 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC9.99□□□□□ -0.81
CfdP03953 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC9.99□□□□□ -0.81
CfdP03953 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
CfdP03953 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC9.99□□□□□ -0.81
CfdP03953 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC9.99□□□□□ -0.81
CfdP03953 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
CfdP03953 Gm7029-201ENSMUST00000173226 450 ntBASIC9.99□□□□□ -0.81
CfdP03953 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
CfdP03953 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC9.99□□□□□ -0.81
CfdP03953 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC9.99□□□□□ -0.81
CfdP03953 Gm39404-201ENSMUST00000216350 313 ntBASIC9.99□□□□□ -0.81
CfdP03953 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 AC162801.1-201ENSMUST00000220612 198 ntBASIC9.99□□□□□ -0.81
CfdP03953 Gm45930-201ENSMUST00000221330 292 ntBASIC9.99□□□□□ -0.81
CfdP03953 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 Gm10012-201ENSMUST00000078252 192 ntBASIC9.99□□□□□ -0.81
CfdP03953 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
CfdP03953 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC9.99□□□□□ -0.81
CfdP03953 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 Gm18782-201ENSMUST00000209023 1399 ntBASIC9.99□□□□□ -0.81
CfdP03953 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 Gm45089-201ENSMUST00000208082 2040 ntBASIC9.99□□□□□ -0.81
CfdP03953 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC9.99□□□□□ -0.81
CfdP03953 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CfdP03953 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
CfdP03953 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CfdP03953 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CfdP03953 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CfdP03953 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms