Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ldb2O55203 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ldb2O55203 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ldb2O55203 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ldb2O55203 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ldb2O55203 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ldb2O55203 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.92□□□□□ -0.5
Ldb2O55203 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ldb2O55203 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ldb2O55203 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ldb2O55203 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb2O55203 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.91□□□□□ -0.5
Ldb2O55203 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.91□□□□□ -0.5
Ldb2O55203 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb2O55203 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb2O55203 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ldb2O55203 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb2O55203 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.91□□□□□ -0.5
Ldb2O55203 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.91□□□□□ -0.5
Ldb2O55203 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.91□□□□□ -0.5
Ldb2O55203 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb2O55203 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.91□□□□□ -0.5
Ldb2O55203 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb2O55203 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb2O55203 Gm15236-201ENSMUST00000117309 379 ntBASIC11.91□□□□□ -0.5
Ldb2O55203 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.91□□□□□ -0.5
Ldb2O55203 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb2O55203 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb2O55203 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.91□□□□□ -0.5
Ldb2O55203 Gm5616-201ENSMUST00000165252 384 ntBASIC11.91□□□□□ -0.5
Ldb2O55203 Gm8741-201ENSMUST00000174736 384 ntBASIC11.91□□□□□ -0.5
Ldb2O55203 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.91□□□□□ -0.5
Ldb2O55203 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.91□□□□□ -0.5
Ldb2O55203 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb2O55203 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Ldb2O55203 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.91□□□□□ -0.5
Ldb2O55203 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.91□□□□□ -0.5
Ldb2O55203 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb2O55203 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb2O55203 Mir433-201ENSMUST00000093564 124 ntBASIC11.91□□□□□ -0.5
Ldb2O55203 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb2O55203 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb2O55203 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb2O55203 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb2O55203 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ldb2O55203 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb2O55203 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb2O55203 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ldb2O55203 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.91□□□□□ -0.5
Ldb2O55203 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb2O55203 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb2O55203 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ldb2O55203 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ldb2O55203 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb2O55203 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ldb2O55203 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb2O55203 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb2O55203 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb2O55203 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ldb2O55203 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb2O55203 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.9□□□□□ -0.5
Ldb2O55203 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb2O55203 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb2O55203 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb2O55203 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb2O55203 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Ldb2O55203 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.9□□□□□ -0.5
Ldb2O55203 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb2O55203 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb2O55203 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.9□□□□□ -0.5
Ldb2O55203 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.9□□□□□ -0.5
Ldb2O55203 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ldb2O55203 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.9□□□□□ -0.5
Ldb2O55203 Gm9192-201ENSMUST00000183221 985 ntBASIC11.9□□□□□ -0.5
Ldb2O55203 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.9□□□□□ -0.5
Ldb2O55203 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb2O55203 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb2O55203 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb2O55203 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb2O55203 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb2O55203 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb2O55203 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb2O55203 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ldb2O55203 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb2O55203 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb2O55203 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb2O55203 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb2O55203 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ldb2O55203 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb2O55203 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ldb2O55203 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ldb2O55203 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Ldb2O55203 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ldb2O55203 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ldb2O55203 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ldb2O55203 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ldb2O55203 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ldb2O55203 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ldb2O55203 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ldb2O55203 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms